| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3247 |
|---|
| Symbol | |
|---|
| ID | 3566385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3497921 |
|---|
| End bp | 3498265 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637681718 |
|---|
| Product | Rieske (2Fe-2S) region |
|---|
| Protein accession | YP_286447 |
|---|
| Protein GI | 71908860 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.000000000206921 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAC CCGTATTCGT GATGAAAAAG AATGAACTTG AGGCCGGCAA GGTCCGCAAG
TTCGATCTCT GCGGCAACGC GATTGCCGTC TACAACCTGA ACGGTACGTT CTACGCCACT
CAGGACAACT GTACGCATGC AACCGCCTCG CTGTCGGAAG GAGACATTGT CGACGACGAG
TGCATTGCCT GCCCGGTCCA CGACGGCACC TTTCACATTC CCACGGGGCA GCCGATGAGC
TTCCCGTGCG AACACGCCAT CCGGACCTAC AAGGTGATCG ACCAGGGCGA TGCCGTCATG
GTCGATTTCG ATCAGGAAGC CGACGAAGCG GCTGACGCTA TTTAA
|
|---|
| Protein sequence | MSEPVFVMKK NELEAGKVRK FDLCGNAIAV YNLNGTFYAT QDNCTHATAS LSEGDIVDDE
CIACPVHDGT FHIPTGQPMS FPCEHAIRTY KVIDQGDAVM VDFDQEADEA ADAI
|
|---|
| |