Gene Daro_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3230 
Symbol 
ID3566576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3481085 
End bp3481954 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content63% 
IMG OID637681701 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_286430 
Protein GI71908843 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value0.95582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.900687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCAA CTAGCACCAC CGAACATATC GATATCCGTG GCCTGCGTTA TCACGTCCGC 
CACTGGGGAG CGGTTGATGC GCCGAAGATC TTCCTGCTGC ACGGCTGGAT GGATTCGTCG
GCCACCTTCC AGTTTGTGGT CGATGCCTTC GAGAAGTCCT GGCATGTTAT TGCGCCGGAC
TGGCGCGGCT ACGGCGATAG TGAATGGCTG GGGCGGCCCT ACTGGTTTCC CGATTATTAC
GCCGATCTCG AAGCGCTGCT CCAGCATTAC TCGCCGGATG AGCCGGCGCA ACTGGTCGGG
CACAGCATGG GGGCGAATAT TGCCGCGACC TTTGCGGCCT TGCGCCCGCA TCGGGTGGCG
CGGCTGGCCA TGCTGGACTT TCTCGGTCTG AAGCCGGAGC CGAGCATCGA TGCGCCGACC
CAGATCGGCA AGTGGCTGGA CGAGATTGCC GACCAACCCC GCCTGCGGGT CTATCCGGAC
CATGCCGCAC TGGCCCGCCG CCTGCGCTTC GCCAATCCGC GCCTGACGGC CGAGCGGGCT
GAATTTCTCT CCCGTGCGGT CAGTCGGACA ACCGCCGACG GCTCGGTCGA AATGGCCTGC
GACCCCTGGC ACAAGGTGGC CTCGCCGGCG CTGTACCGGG TCGAGGATGC GATGGCAGCC
TGGCGAAAGA TTACCTGCCC GGTGCTGATG CTGATCGCCG ACAAGGGCTT TGTCCGCATG
CGCTTTGGCC GGGATACACC TGAATTCCAG CAGCGGATCG AATCTTTCGC TGATGTTCAG
GCGAAGGACA TTCCCGAGGC GGGGCATAAC CTGCAACACG ATCAGCCTGA ACTGGTTGCG
GCCGAACTCG AGGGATTCCT TCAGCGGTAG
 
Protein sequence
MSPTSTTEHI DIRGLRYHVR HWGAVDAPKI FLLHGWMDSS ATFQFVVDAF EKSWHVIAPD 
WRGYGDSEWL GRPYWFPDYY ADLEALLQHY SPDEPAQLVG HSMGANIAAT FAALRPHRVA
RLAMLDFLGL KPEPSIDAPT QIGKWLDEIA DQPRLRVYPD HAALARRLRF ANPRLTAERA
EFLSRAVSRT TADGSVEMAC DPWHKVASPA LYRVEDAMAA WRKITCPVLM LIADKGFVRM
RFGRDTPEFQ QRIESFADVQ AKDIPEAGHN LQHDQPELVA AELEGFLQR