| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3220 |
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| Symbol | |
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| ID | 3566605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3471889 |
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| End bp | 3472527 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637681691 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_286420 |
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| Protein GI | 71908833 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 70 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.301759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTGA CCATCCGCTC CGCCTTCCTC GTGCTGTTCT GCGCCGTGAG CTTGCCGGTG
GCCGCGTCGG CGAGCGGCGC AATTTACGGG TTTGTCGACG AAGATGGCGT CGAGCGTTTC
AGCAATGTGC CCGACGACCG GCGCTACAAG CTGGTGCTGA CCGACCGGCT GGCCCCGGCC
ACGGCCGCCT TGCAGGTGCC GCGTGGTGTC TTCGCCCTGC CTTACGAGCA GCGCCCTTTC
CATGGCGCGA TTCACGAGGC CAGCCGCAGT ACCGGCGTCG ACGCGGCCTT GCTGCATGCC
GTCATCTCGG TCGAGTCGGG CTACCGGGAG CACGCCGTTT CAGCCAGGGG GGCGAGCGGA
CTGATGCAGC TGATGCCGGC CACGGCCCGC CGCTATGGCC TGGTCAATCG GCAGGACCCG
GCCGAGAACA TCCGCGCCGG CGCCCGTTAC CTGCGCGACC TGCTGGCCCT GTTCGACAAC
GACATCGAAC TGGCGCTGGC CGCCTACAAT GCCGGCGAGA ATGCGGTGCT GCGCTTTGGC
CGGCGCATCC CGCCCTACGG GGAAACCAAA CGCTACGTCC CGCTCGTCAT GGCCCACTAC
CAGCGAATCA GCGCGACTCC CCGGCGTCGT GAATATTGA
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| Protein sequence | MPLTIRSAFL VLFCAVSLPV AASASGAIYG FVDEDGVERF SNVPDDRRYK LVLTDRLAPA
TAALQVPRGV FALPYEQRPF HGAIHEASRS TGVDAALLHA VISVESGYRE HAVSARGASG
LMQLMPATAR RYGLVNRQDP AENIRAGARY LRDLLALFDN DIELALAAYN AGENAVLRFG
RRIPPYGETK RYVPLVMAHY QRISATPRRR EY
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