| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3202 |
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| Symbol | |
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| ID | 3566872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3451834 |
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| End bp | 3454011 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637681673 |
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| Product | ABC transporter, transmembrane region:ABC transporter related |
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| Protein accession | YP_286402 |
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| Protein GI | 71908815 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.612562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG TTTCGAGTGG GTCTGTGGGC GTCGGTGTCT CCGGGGTGCG GGAAGATATC
CTGCATCATG ACCCTCTGTT GGATTGCCTG GTCGAACTGA CGCGCATTCA CGGGCGGCCG
AGTACCCGGG CGGCGCTGAT TTCGGGATTG CCCCTGGAGA AAGGCGTCTT GTCGCCTTCT
CTCTTTGCGC GTTCGGCCAG TCGTGCCGGG CTTTCGGCAA AGGTTGTCCG GCGCTCGCTG
GATCGTATTG ATGACGCGCT TCTGCCGGCG GTTTTGCTGC TGAAAAACGA GGAGGCCTGC
GTTCTTCTCG GGTGGGATGC TTCCGGGCAG ATGGCCCGCT TGCTGTTTCC CGAGACGGGC
CAAGGGACGG TCCTGTTGTC GCGAGAGATG TTGGCCGACC GCTATCTGGG CATCGCCATA
TTTGCCCGGC CGCATTTCAG ATTTGACAGT CGTACGCCTC AGGTCGGCGA CGTCAAACTT
CGTCACTGGT TCTGGGGTGC GCTGGCCGAT CAGTGGCCAG TCTATCGTGA TGTTCTCGGC
GCAGCCATGC TGATCAATCT GGTGGCCCTG GCCATGCCGC TCTTCACGAT GAATGTGTAT
GACCGGGTGG TTCCCAATCG GGCATTTGAA ACGCTCTGGG TGCTGTCGCT CGGAATCATG
CTGGTCATCG GGATCGATAT GGTCCTGCGC TCCTTGCGCG GCTATTTCAT CGACCTGGCC
AGCGCACGGA TCGATATGCA GCTTTCCGCC AAGATCATGG AGCGCGTGCT TGGTGTCCGG
ATGGAGGCCA GGCCGGCTGC CGTCGGTGCC TTTTCATCCA ATTTGCGTTC TTTCGAGTCG
GTACGGGATT TCATTACCTC GGCTTCGGTT ACCGCCTTCA TCGATCTGCC TTTCGCCTTG
TTGTTCGTGC TGGTGATTGC GATCATTGCT TGGCAGTTGA TCATTCCCGT ATTGCTGGCC
ATCGTGTTCG TGGTTATCTA CGCCTACGTG CTGCAGCACA AGATGCATGC CTTGTCGGAG
ACGACTTACC GGGCGTCCGC CCAGCGGAAC GCCACGCTGA TCGAAAGTCT GACGGCGCTG
GAAACGATCA AGACCCAAGG CGCCGAAGGT GTGATGCAGG CGAAGTGGGA AAAGACGGTG
GCCTTCGTGG CCAGGGTCAA TAACCAGATG CGTTTCCTTT CGGCGGCCGC CACCAATGGC
GCCATGGAGA TTCAACAAAT TGTTAACGTC GTTGTCGTCA TTGCCGGCGT CTATCTGATT
GGTGATGGCA AGCTGAGCAT GGGCGGCCTG ATTGCCTGCA CGATGCTCAC TTCGCGGGCC
GTGGCGCCAC TGGGGCAGAT GGTTGGCTTG CTGATGCAGT ATCACAATGC CAAAGTGGCG
CTGACCTCGC TTGAGCAGAT CATGAAAAAC CCGGTCGAAA GGCCGGCCGA CGCCAACTTT
GTTCATCGCC CGGAGCTGAA GGGGGAAATC GAGTTTCGCG ATGTCGAGTT CAGCTATCCT
AATTCCCAGA TTGCCGCGTT GCGAGGCCTC AGTTGCCGGA TCAACGCCGG CGACAAGGTG
GTCGTCATCG GTCGTGTCGG GTCTGGCAAG ACGACCTTGC AGAAGCTGCT GCTGGGCTTG
TATCAGCCGA CCGCTGGGGC GGTCAGTATC GATGGCGTCG ACCTTCGCCA ACTGGACCCG
GCTGACCTGC GGCGCAACAT CGGCTACGTT GCCCAGGATT TGACGTTGTT CTATGGCACC
TTGCGCGAAA ACATTGCCAT CGGGGCGCCC TATGCCGACG ACGCCGCCAT CGTGGCCGCT
GCCGAGGCCG GTGGCTTGAC CGAATTCGTC AATCGTCATC CGGATGGTTT CGACATGATG
ATCGGCGAGC GGGGCGACTC GCTTTCCGGT GGTCAGCGGC AGGGTGTGGC GATTGCCCGG
GCTTTCCTGA TGGACCCGCC GATTTTGCTG CTCGACGAGC CGACCAGCGC GATGGATTTC
TCCTCAGAGC AGCAGTTCAA GGAGCGACTC CGGCTGATGG CGGCTCACAA GACCGTCGTG
ATCGTTACCC ATCGCAACAG CCTGCTCGAT CTGGCGACGC GTGTGATGGT CGTTGATGAT
GGCCGCATCG TTGCCGATGG TCCGCGTGAT CAGGTCATTC AGGCGCTGCA GAGTGGTCGT
GTCGGGAGAG CATCATGA
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| Protein sequence | MSEVSSGSVG VGVSGVREDI LHHDPLLDCL VELTRIHGRP STRAALISGL PLEKGVLSPS
LFARSASRAG LSAKVVRRSL DRIDDALLPA VLLLKNEEAC VLLGWDASGQ MARLLFPETG
QGTVLLSREM LADRYLGIAI FARPHFRFDS RTPQVGDVKL RHWFWGALAD QWPVYRDVLG
AAMLINLVAL AMPLFTMNVY DRVVPNRAFE TLWVLSLGIM LVIGIDMVLR SLRGYFIDLA
SARIDMQLSA KIMERVLGVR MEARPAAVGA FSSNLRSFES VRDFITSASV TAFIDLPFAL
LFVLVIAIIA WQLIIPVLLA IVFVVIYAYV LQHKMHALSE TTYRASAQRN ATLIESLTAL
ETIKTQGAEG VMQAKWEKTV AFVARVNNQM RFLSAAATNG AMEIQQIVNV VVVIAGVYLI
GDGKLSMGGL IACTMLTSRA VAPLGQMVGL LMQYHNAKVA LTSLEQIMKN PVERPADANF
VHRPELKGEI EFRDVEFSYP NSQIAALRGL SCRINAGDKV VVIGRVGSGK TTLQKLLLGL
YQPTAGAVSI DGVDLRQLDP ADLRRNIGYV AQDLTLFYGT LRENIAIGAP YADDAAIVAA
AEAGGLTEFV NRHPDGFDMM IGERGDSLSG GQRQGVAIAR AFLMDPPILL LDEPTSAMDF
SSEQQFKERL RLMAAHKTVV IVTHRNSLLD LATRVMVVDD GRIVADGPRD QVIQALQSGR
VGRAS
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