Gene Daro_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3112 
Symbol 
ID3568163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3354075 
End bp3355700 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content59% 
IMG OID637681583 
Productchemotaxis sensory transducer 
Protein accessionYP_286312 
Protein GI71908725 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTCT CCAGCGCTCG TGTATCGACT CGAATATATC TGCTCATCGG GCTCACCTTG 
CTTGGTCTGC TGACACTCTG TTTAACCTCT CTCTATCAGC TCAAGGGCAG CATGATGGAG
GATCGTAAGA TGAAGCTGCG CAACCTCGTC GAGGTCGCTG TCGGCGTGGT CGACCAGCAG
CACAAGCTGG CCATTGATGG CAAGCTGAGC GACGAAGAGG CAAAGAAATC CGCTCGCGAC
ATCCTCCGCG GCTTACGCTT CAACAAGGAG GAGTACTTCT TCGGTATTGA GACCAACGGG
GTTTATGTCC TGCATGGCGC CAATCCGGCA GCCGAAGGTC AGAACAAGAT CGACCTCAAG
GACACCAACG GCAAACTGAT TATCAAGGAA CTGATCGGCG CTGCCCAGTC TGGTGGCGGC
TTTGTCGATT ACTGGTTTCC CCGGGCCGGT CAACAAAAGT CCGAGCCGAA GCTTTCCTAT
GCCGCACTTT TCACGCCTTG GGGCTGGGCA ATCGGCACAG GCATCTATAT TGATGATATC
GACCGCGAAT ACAAGGAAGG GGCCATGCTG CTCGGCGGCA TCTCGGCCGC CCTGCTCGTG
CTCCTCAGCC TGATCGGCTG GCAAATCAGC GTCAGCATCC TGCGTCAATT GGGCGGAGAA
CCGCAGGCAG CGACCGAGAT CATGCAGCGG GTTGCCGGTG GCGACCTTAC TGCACGCCTC
GACAACGCCC CCGCCGGCAG CCTGCTCCAT GCACTTGGCA CCATGGTCGG CTCGCTGCGG
CAAATGGTCA CTGCCATCAA CGTCGATGCC AACAAACTGG TGGCCAATGC CGACCACATC
GCGCGCGCCT CTGACGAGGT CGCCAAGGCG GCCGAGCATC AGGCTGACTC TACCTCGGCC
ATGGCTGCCG CCATCGAAGA ACTGACGGTC AGTTCCAACC ACATTTCCGA CAGTGCCCGT
GAAACAGCCC GCGAAACCTC AGAGGCCGCA GAACTGGCAG GACGCGGCAC TGAGCGAGTC
AATCAGGCGA GTATGGCCAT CCAGAAAATT GCCGACACGG TCACCGATGC ATCTGGCCGC
ATTCACGCCC TGGAAGAACG TGCCAATCAG GTATCGACCA TCGCCAGCGT CATCAAGGAT
ATTGCCGGGC AAACCAATCT GCTCGCGCTC AATGCCGCCA TTGAAGCAGC ACGCGCTGGC
GAACAGGGCC GAGGCTTCGC TGTCGTGGCC GATGAAGTTC GCAAGCTGGC TGAACGCACC
TCCTCGGCGA CCCTGGAAAT CGAGCAGATG ATCAGCGGCA TCCAGCAAGA CACGGTTGGC
GCGGTTGAAG CCATGAACGC GGCCCTGCCT GAGGTACAGG AAGGCGTTGC ACTCGCAACA
TCGGCATCCG AGTCACTGCA GGCGATTGAG GACGGCTCGC GGCGGACCCT GGAGCGTGTT
GGGGAGGTTG CCGACGCCAC CAAGGAGCAA AGCACGGCCA GCACTTCCAT TGCTCAACGC
GTCGAACAAA TTGCCAACAT GGTCGAGGAA ACCACGGCGA CCATTCGCGG CACAGCGGAG
TCGGCACACG AACTCGAAGA CATTGCCGGC AATCTGAAAG AACTGATCAG CCAGTTCAAG
ACCTGA
 
Protein sequence
MGLSSARVST RIYLLIGLTL LGLLTLCLTS LYQLKGSMME DRKMKLRNLV EVAVGVVDQQ 
HKLAIDGKLS DEEAKKSARD ILRGLRFNKE EYFFGIETNG VYVLHGANPA AEGQNKIDLK
DTNGKLIIKE LIGAAQSGGG FVDYWFPRAG QQKSEPKLSY AALFTPWGWA IGTGIYIDDI
DREYKEGAML LGGISAALLV LLSLIGWQIS VSILRQLGGE PQAATEIMQR VAGGDLTARL
DNAPAGSLLH ALGTMVGSLR QMVTAINVDA NKLVANADHI ARASDEVAKA AEHQADSTSA
MAAAIEELTV SSNHISDSAR ETARETSEAA ELAGRGTERV NQASMAIQKI ADTVTDASGR
IHALEERANQ VSTIASVIKD IAGQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRKLAERT
SSATLEIEQM ISGIQQDTVG AVEAMNAALP EVQEGVALAT SASESLQAIE DGSRRTLERV
GEVADATKEQ STASTSIAQR VEQIANMVEE TTATIRGTAE SAHELEDIAG NLKELISQFK
T