| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3107 |
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| Symbol | |
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| ID | 3568504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3348962 |
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| End bp | 3351361 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637681578 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_286307 |
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| Protein GI | 71908720 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.765319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGC GCACGCCTAC CACCAAGAAT TGGCTCATGT TCCCGCTCCT CCCCAATGCC
GCCCCCCGCC AGAATTGGTT ATGGCTTGCA CCGTATGTTG CGATTGGCAT TTTCGCCATG
GCCATGCTGA TCCTGACCGG GCTGCTGCAA TGGCGTGAAC TGGACACGGC TCGCTCCGCG
CTGGAAGGCG ACATGCACTG GGCGGAACGG ACCATCGAAA ACCGCCTGCA CGCCCATCAG
GATCTGCTCA GCGAGCTTGG CCGCGAACAG GAATTCAAGC AACTGACCTA TGAATCGTTC
CAGGTCAAGG CCACGCGCTA TGTGCGCGAT GCCCCCGAAA TCCAGGCCAT CATCTGGGTC
GATACCGATG GCAAAGTGGA ATGGGTCGCC CCCAATGAAT CGACGGCCAC CTTCGTCGGC
GAACAACTCA GCGGCGTCCG CCTGGCTGCC CTGCAGGAAG CCCTGCGCGT ACGGCGTACG
GTCGTCTCGC CCGACTATCG GGATGATACG CAACGCCCCA CCCACGACAT CATCCTGCCA
GTCCAGCGGG GTAGTGCCGA CATCGGCGCC TTCATTGCCC TGCAATCCCT GGAGACCCTG
CTCCGCGCCA CGCTGCCCAC CGTCTTCACA GCCCGCTACA GCCTGACCGT GCTCGATGCA
GCCAACCGGG AGGTGCTCAG CAACTCGTCG GTCAAACCCA CCGACCGCCA GCTTTCAGGC
ACCATCAGCC TCGAACTGCC GAACAATCGC CTCGGCCTGA ATATCGTGGC CTATCGGGTC
GGCGGTGCCT GGCTCCCCTT CGTCCCGGCC GGCCTGATCA TCATCCTGAC CGTGATCGCC
ACGATCACCC TGATCAAGTT GCGCCAGCAC GCCAGACACC GGGCTGCAAC GGAAGAAGAG
TTGCGCGCCG CCTACGCCTT CCGGCAAGCC ATGTCCGAAT CGCTGATCAC CGGCCTGCGC
GCCATCGACC TCGAAGGTCG GATCACCTTC GTCAACGCCG CCTTCTGCCG GATGACCGGC
TTCGACGAAA GCGAACTGGT CGGCATCAAG CCACCCTATC CCTACTGGCC GCCGGAAGAG
TTCAACCGCC TGCAGCACAA CATCGACACT GCGCTGGCCG GGAAGGCTCC GGCCAGCGGC
TTCGAGATGC GTATCATGCG CAAGAACGGT GATCGTTTCG ACGTCCGCCT CTACTTCTCG
CCGCTGATCG GCACCGATGG CCAGCAGATG GGCTGGATGG CCTCGATGAA CGACATTACC
GAGCCCAAGC GAGTCCGCGT CGAACTCGAA CGGGCCCATG AACGTTTCGT CACCGTGATC
GACGGCCTCG ACTCGGCGGT CCACGTCGCC GATGTGCAAA CCGGTGAAAT TCTCTTTGCC
AACCGGGCTT TCCAGAATAT TTTCGGCTTC GATACCGTTG GCCGCAATTC GGCCCAGGTC
ACTGCCCCCT GCCGCCCCAA TCCGGAATGG TTGGCCCGCG ACCCGCTACA GATCAGCGCC
GAGGAATTGC CTTGCGAACT GTTCGATGGC GAAATCCAGC ACACCCTGTC CGGCCACTGG
TACCACCTGC ACGAACGCGC CATCCGCTGG GTTGACGGCC GCACCGTGCG CGTCCAGATC
GGCGCCGACA TCACCGACAA GAAGCACATC GAGGAAGTCA ATCTGCAACA GCAAAAGCGC
CTCGAACAGA CCTCGCGCCT GATCACCATG GGCGAAATGG CTTCATCGCT GGCCCACGAA
CTGAACCAGC CGCTGTCAGC CATCGCCAAT TATTGCGCCG GCTGCGTCAA ACGCATGCAG
GCCGGCAACT ACCGGCTGGA TGACCTGCTG GCTGCCATGC AGAAGGCCTC CAGTCAGGCC
GAGCGGGCCG GCAAGATCAT CCGCCGGATG CGTGACATGG TTAAAAAAGG CGATCCGAAC
CGGCAACCAA TCGCCCTCGA AGAACTGGTC GACGAAGCCC GCGCCTTCGC CGACATCGAG
GCTCAGCGCA CCGGCACACA GATCATCGTC GACCTCCCGG AGAACTTGCC GCGGATTGTC
GTCGACCGCA TCATGATCGA GCAGGTGCTG CTCAATCTGG TCAAGAACGG CATTGAGGCC
ATGAGCGATG TGCCGTTCGA ACGCCGCCAG CTGTCCCTGC AGGCCAAGGT GGTCGACGAA
CGAATGCTGG AAATCTCAGT AACCGACCAG GGACACGGAC TTGCCGAGGA AGACATTGAA
AAGATTTTTG CCCCCTTCTA CACCACCAAG CCGGAAGGCA TGGGCATCGG CCTGGCCATC
TGCCGTTCTA TTATCGAATT CCATCAGGGG CGGCTGTGGG TCGAACCACG ACGAGAAGGC
GGCACCGTGT TCCATTTCAC CGTACCAATC GAGGAAACTG TCGAGGTGAC CCATGAGTAA
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| Protein sequence | MAERTPTTKN WLMFPLLPNA APRQNWLWLA PYVAIGIFAM AMLILTGLLQ WRELDTARSA
LEGDMHWAER TIENRLHAHQ DLLSELGREQ EFKQLTYESF QVKATRYVRD APEIQAIIWV
DTDGKVEWVA PNESTATFVG EQLSGVRLAA LQEALRVRRT VVSPDYRDDT QRPTHDIILP
VQRGSADIGA FIALQSLETL LRATLPTVFT ARYSLTVLDA ANREVLSNSS VKPTDRQLSG
TISLELPNNR LGLNIVAYRV GGAWLPFVPA GLIIILTVIA TITLIKLRQH ARHRAATEEE
LRAAYAFRQA MSESLITGLR AIDLEGRITF VNAAFCRMTG FDESELVGIK PPYPYWPPEE
FNRLQHNIDT ALAGKAPASG FEMRIMRKNG DRFDVRLYFS PLIGTDGQQM GWMASMNDIT
EPKRVRVELE RAHERFVTVI DGLDSAVHVA DVQTGEILFA NRAFQNIFGF DTVGRNSAQV
TAPCRPNPEW LARDPLQISA EELPCELFDG EIQHTLSGHW YHLHERAIRW VDGRTVRVQI
GADITDKKHI EEVNLQQQKR LEQTSRLITM GEMASSLAHE LNQPLSAIAN YCAGCVKRMQ
AGNYRLDDLL AAMQKASSQA ERAGKIIRRM RDMVKKGDPN RQPIALEELV DEARAFADIE
AQRTGTQIIV DLPENLPRIV VDRIMIEQVL LNLVKNGIEA MSDVPFERRQ LSLQAKVVDE
RMLEISVTDQ GHGLAEEDIE KIFAPFYTTK PEGMGIGLAI CRSIIEFHQG RLWVEPRREG
GTVFHFTVPI EETVEVTHE
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