Gene Daro_3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3062 
Symbol 
ID3566237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3305534 
End bp3306346 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content55% 
IMG OID637681533 
ProductGTP cyclohydrolase 
Protein accessionYP_286262 
Protein GI71908675 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000000000000921807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000032257 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCACCC CGACCTCCAA CATTCCCGAC GTTCAGAACT CCGCCGACAC GCGCCACATC 
GCCATCAACA AGGTCGGTAT CAAATCCATC CGTCACCCGA TCAAGGTTCA AGACAAATCG
GCCGGCATCC AGCACACCAT CGCCATGTTC AACATGTACG TTGGTCTGCC GCACAACTTC
AAGGGCACCC ACATGTCCCG TTTCGTGGAG ATCCTGAATA GCCACGAACG TGAGATTTCA
GTCGAAAACT TCCCGACCAT GCTGCGCGAT ATGGTCGTCA AACTCGAGGC CGAAACCGGC
CATATCGAGA TGAACTTCCC GTACTTCATC AACAAGACGG CACCGGTTTC CGGCGTGCAG
AGCCTGATGG ATTACGACGT CACCTTCATC GGCGACATCT GCCATGGCGA AATCGCCACC
TCGGTCAAGG TCGTCGTGCC GGTGACCAGC CTGTGCCCCT GCTCCAAGAA GATCTCCGAG
TACGGCGCCC ACAACCAGCG CTCCCACGTC ACCGTCACAG CCAAGACGAA CGATTTCATG
TGGATCGAGG AAATCGTCCA ACTCGTCGAA CAGGAAGCCT CCTGCGAGCT TTTTGGCCTG
CTCAAGCGCC CTGACGAAAA ATACGTCACC GAACGCGCCT ACGACAACCC CAAGTTTGTC
GAAGACATGG TTCGTGATGT GGCAGCCCGC CTCAACGCAG AAGCACGTGT CGATGCCTAC
GTTGTTGAAT CAGAAAACTT CGAATCGATT CACAATCACT CAGCCTATGC CCTGATCGAA
AACGATAAGA AGAATCCTTT AGCTCACGCC TAA
 
Protein sequence
MSTPTSNIPD VQNSADTRHI AINKVGIKSI RHPIKVQDKS AGIQHTIAMF NMYVGLPHNF 
KGTHMSRFVE ILNSHEREIS VENFPTMLRD MVVKLEAETG HIEMNFPYFI NKTAPVSGVQ
SLMDYDVTFI GDICHGEIAT SVKVVVPVTS LCPCSKKISE YGAHNQRSHV TVTAKTNDFM
WIEEIVQLVE QEASCELFGL LKRPDEKYVT ERAYDNPKFV EDMVRDVAAR LNAEARVDAY
VVESENFESI HNHSAYALIE NDKKNPLAHA