Gene Daro_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3046 
SymbolileS 
ID3568250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3288449 
End bp3291247 
Gene Length2799 bp 
Protein Length932 aa 
Translation table11 
GC content61% 
IMG OID637681517 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_286246 
Protein GI71908659 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.140693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT ACAAAGACTC CCTTAACTTG CCGGATACTG CTTTCCCGAT GCGCGGTGAC 
TTGCCCAAGC GCGAGCCGCA ATGGGTCGCC CAGTGGCAGG AGAAAAAGCT CTACCAGCGT
ATCCGCGAAA TCTGCGCCGG TCGGCCGCGT TTTACGCTGC ACGACGGCCC GCCCTACGCC
AATGGCGACA TCCACATCGG TCACGCGGTC AACAAGGTGC TCAAGGACAT CATCGTTCGC
TCAAAGACGC TTTCCGGTTT TGATGCGCCT TACGTCCCGG GCTGGGACTG CCATGGTCTG
CCGATCGAGC ATCAGATCGA AAAGCTGCAC GGCAAGGCCA TTCCAGCCGA CAAGGTGCGC
GAACTGTCGC GTGCCTATGC CGCCGAACAG GTCGAGCGCC AGAAGAAAGA TTTCATCCGT
CTCGGTGTGC TCGGCGATTG GGGCAATCCT TACCTGACCA TGAATTTTTC GGCCGAGGCT
GGCGAAATCA GAGCCCTGGG CAAGATACTC GAACAAGGCT ACCTCTATCA GGGCCTGAAG
CCGGTCAACT GGTGTCTGGA CTGCGGTTCG GCACTGGCTG AAGCCGAGGT CGAGTACGAG
GACAAAAACT CGCCGGCGAT CGATGTTGCT TTCGAAGTCC ATGAAAATCA CACCGCCAAA
CTGGCTGCAG CTTTTGGTCT GACGCATCTG CGTGGCCCGG CTTTCGCCGT GATCTGGACG
ACGACGCCAT GGACCTTGCC GGCCAACGAA GCGGTCAGTG TGCATCCGGA TTTGACCTAC
GACCTGATCG AAACCGAGAA GGGCGCCCTG ATCCTGGTGC GCGAACTGGC CGAAGCCGCC
CTCAAACGCT ATGGCCTTGA AGGCACGGTT GCCGGCTCGT GCACGGGCGA CAAGCTCGAC
CAGATGCTGC TCAAGCACCC GTTCCAGAAC CGCGATGTCG CCATCATCTG CGGCACGCAC
GTTACGACCG AAGCTGGTAC CGGTCTGGTG CATACCGCGC CGGCCCATGG CGTGGACGAC
TACAACATCG GCAAGAAATA CGGCCTGCCG GTAAACAACC CGGTTGGCAA TGACGGCAAG
TTCATCAGCA CGACGCCTGC ATTGTCGGTT GGCGAGCTGG CCGGCAAGAC GGTCTGGGAA
GCGAATCCGC AGGTCCTGCA GGAGCTCGAA GCCCGTGCTC GCCTGCTCAA GAATGAGCGC
ATCCAGCACA GCTACCCGCA CTGCTGGCGC CACAAGACGC CGATCATCTT CCGCGCCACG
ACCCAGTGGT TCATCGGCAT GGAAAACAAG AAGAACGAGG ATGCCTCGAC CCTGCGCTGG
ATTGCCGAGC GCGCCGTTGA TGAAACCCAG TTCTTCCCGG CCTGGGGTCG CGCCCGCCTG
GAAGGCATGA TGAAGACTCG CCCGGACTGG TGCGTTTCCC GCCAGCGCAA CTGGGGCGTG
CCGATCCCGT TCTTCCTGCA CAAGGAGACT GGCCAGCCGC ATCCGCGTAC CGCCGAGCTG
ATTGAGCAGG TCGCCCTGCG TGTCGAAAAA TCGGGTATCG AAGCCTGGTT CAGCCTCGAT
GCGGCCGAAC TGCTCGGCGC CGAGGCAGAC CAGTACGTCA AGATGAAGGA CACGCTGGAT
GTCTGGTTCG ACTCCGGCAC AACCCACTGG CACGTCATGC GCGGCTCGCA TGCGGCCGAC
CACACCTATC CGGCGGACCT CTATCTCGAA GGCTCCGACC AGCATCGCGG CTGGTTCCAG
TCCTCGCTGC TCTCCGGTTG TGCCATCGAC GGCCGCGCCC CGTACAAGGG GCTGCTGACG
CACGGCTTCG TGGTCGACGG CAAGGGCCAC AAGATGTCCA AGTCCAAGGG TAACGTCATT
GCGCCGCAAC AGGTTTCGGA CAAGATGGGC GCCGACATCC TGCGTCTATG GACGGCGTCG
ACCGACTACT CCGGTGAGCT GACCATTTCC GACGAAATCC TCAAGCGCGT CGTTGAGGGC
TACCGCCGCA TTCGTAACAC GCTGCGTTTC CTGCTGGCCA ATGTCTCCGA CTTTGATGCG
GCTACTGACA TGTTGCCGAT CGACCAGTGG CTGGAAATTG ACCGTTACGC GCTGGCGCTG
ACGCGTGAAT TGCAGGATGG CTGCCGCGCC GATTTCGACA AGTACGAATT CCACCGCGTC
GTCCAGGCCC TGCAGACTTT CTGTTCGGAA GATCTCGGTG GCTTCTACCT CGATATCCTG
AAGGATCGTC TGTACACGAC GGCACCGAAG TCGGTTGCCC GTCGCTCGGC CCAATCGGCC
CTGTGGCACA TCACGCAGGC TTTCGTTCGC TTGCTGGCGC CGATCACCGC CTTTACGGCC
GAAGAGGTCT GGCAGGTATT GACCGGCAAG GCCGACGACT CGGTGATGTT CCAGGTCTGG
CACGACCTGC CGGCCTTGGC CGGCGAGGGT GATCTGCTGG CCAAATGGGC CTTGATCCGT
ACCGCCCGTG CTGATGTGAC CAAGGCCCTC GAAGCCCAGC GTGAAGCCGG CAAGATCGGT
TCAGCACTGC AGGCCGCTGT CGAAATTCAC TGTGGCGGCG AGAAATACGA AGCCTTGGCT
TCCCTCGGTG ACGACCTGAA GTTCGTTTTC ATCTGCTCGA GTACCGTTGC GGTGCGTGAC
GATAACGAGC AAGTCATCGC CACCCCGCTG GAACACGCCA AGTGCGAACG CTGCTGGCAC
GTCCGTGAGG ATGTCGGTGC CAATACCGAG CATCCGACTC TGTGCGGCCG TTGTGTCAGC
AACCTCTATG GCGAAGGCGA GGTACGTGGC TGTGCCTAA
 
Protein sequence
MADYKDSLNL PDTAFPMRGD LPKREPQWVA QWQEKKLYQR IREICAGRPR FTLHDGPPYA 
NGDIHIGHAV NKVLKDIIVR SKTLSGFDAP YVPGWDCHGL PIEHQIEKLH GKAIPADKVR
ELSRAYAAEQ VERQKKDFIR LGVLGDWGNP YLTMNFSAEA GEIRALGKIL EQGYLYQGLK
PVNWCLDCGS ALAEAEVEYE DKNSPAIDVA FEVHENHTAK LAAAFGLTHL RGPAFAVIWT
TTPWTLPANE AVSVHPDLTY DLIETEKGAL ILVRELAEAA LKRYGLEGTV AGSCTGDKLD
QMLLKHPFQN RDVAIICGTH VTTEAGTGLV HTAPAHGVDD YNIGKKYGLP VNNPVGNDGK
FISTTPALSV GELAGKTVWE ANPQVLQELE ARARLLKNER IQHSYPHCWR HKTPIIFRAT
TQWFIGMENK KNEDASTLRW IAERAVDETQ FFPAWGRARL EGMMKTRPDW CVSRQRNWGV
PIPFFLHKET GQPHPRTAEL IEQVALRVEK SGIEAWFSLD AAELLGAEAD QYVKMKDTLD
VWFDSGTTHW HVMRGSHAAD HTYPADLYLE GSDQHRGWFQ SSLLSGCAID GRAPYKGLLT
HGFVVDGKGH KMSKSKGNVI APQQVSDKMG ADILRLWTAS TDYSGELTIS DEILKRVVEG
YRRIRNTLRF LLANVSDFDA ATDMLPIDQW LEIDRYALAL TRELQDGCRA DFDKYEFHRV
VQALQTFCSE DLGGFYLDIL KDRLYTTAPK SVARRSAQSA LWHITQAFVR LLAPITAFTA
EEVWQVLTGK ADDSVMFQVW HDLPALAGEG DLLAKWALIR TARADVTKAL EAQREAGKIG
SALQAAVEIH CGGEKYEALA SLGDDLKFVF ICSSTVAVRD DNEQVIATPL EHAKCERCWH
VREDVGANTE HPTLCGRCVS NLYGEGEVRG CA