| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2953 |
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| Symbol | |
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| ID | 3566143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3189510 |
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| End bp | 3191612 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637681422 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_286153 |
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| Protein GI | 71908566 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.191776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA AAAGGGGAAT AGCACCTTTC GGGGTGTTGT GTGCCTGTTC ACTGGCATCA
ACGGGGGTTC TGGCCAACGA AGCGTCCAGA ATGCTCGACG AGGTCTCGGT CACTGCAACG
CGCGAGACGC GCTCGACCGG CGAAGTGCCG CAGGCGATCG CCGTCGTCGG CAAGGAAACG
CTGGCCGACA AGAAGATGTT CAACGTCAAG GAAGCGCTGC AGGAAGTGCC CGGCGTGCTG
ATCGACAGCA AGAACGGCGG CTCCGATGCC CGCCTGATCA TCCGCGGTGC CGGCCTCAAG
GCGGCCTACG GCATCCGCGA GATTCAGGTG CTGCGCGACG GTGTTCCCCT GTCCGATCCG
GACAGCTTCA CCCGCCTAGA TTTCGTCGAC ACGCAGGACA TCGAGCGCAT CGAGATCGCC
AAGGGACCGG GCAACCTGTT CGCGGCGGGC AGTGCCGGCG GCGCGATCCA GATCATCTCG
AAGTCGGTAT TCGATGCCCG GGCCAACAAC CTGAAGATCG GCGCCGGCAA CCTCGGCACC
CAGAACTACC ATCTGCGCGT CGGCGGCATG ATCGACGACC GGCAGGCCCT GGCCCTGACC
GTGACCCGTC GCGAAATGGA CAACGACTGG CGCACCTGGA ACCGCTTCGA GACCACGCAA
GCCTCGCTCA AGCACGGCAT TCAGCTGGGC GACGGCGACA TTCTCGAGAG CGAGGCCTCC
TACGCTGAAT CCGACATGCA ATTACCGGGC GCGGTCGATG AAGCCATGTT CCAGACCTTC
AAGCAGACCG GCAAGCAGAA CGGCACCTCG GAAGCATGGA GGCACTCCGG CCGCTACTCC
AAGGTCTGGT TCCTCAACAG CCGTCTGGAA GTACAGCGCG GCAACTTCAC CTTCAAGCCG
CGCATCTACT ACAACACCTG GTACCACTAC CATCCGGTTA CCGGCATCAT CAACGAAACC
GAATCCTGGG TTTCCAACCT GGGCATGGAC CTCGAAGGCA ACTACCGCCA TGCCCAGGGT
ACCCTGGTCG CCGGCATCAC GGCCCGCCAG GAGCGCGCCC CGGATTCGCG CAAGTACGAA
TACCGCGATG TCACCACCGG CGGCGGTGGC CGTATCGTCG CCACGCGTTC CGATGCAAAG
GGAAGACTGG CTGAGATCGA CGACGCGACG ACCTTGCTGA CGGGCGCGTA CATCCAGGAA
TCCTGGCGCC CGAACGAGCG CTGGATCATC GATGCCGGCA TGCGCTACGA CATCGTCGAC
TTCGACGACA ACAACCAGCA ATTCCGCAAG TACGACTACG CCTCCGGCAA GTATGTAGCC
GGCGCCGGTT CGACGCAGAT CAGCAAGACC TTCTACCTGC CGGCCCCCAA AATCGCTGCC
AGCTACCGCT TGCTGCCTGG CTTGAACCTG TTCGCGATGG CCGCCCAGGC CGGCCAGATT
CCCTCATTCA GCGAAGTGTC GACCAACCCG GCACTGGAAG CGCCGGTCGC CCGTAACTAC
GAAGTCGGCC TGAAGGCCCG GGCTGCCGAC TGGTCCTTCG ACACCAGCGT TTACGTCAAT
CCAGTAAGCA AGGACATCGT GCAGCAGAGC AACGGCGGCG TGACGACCTA CCTCAATGCC
GGCAAGACCG ACAAGAAGGG TTTCGAGTTC GCCGGTCGCT ATGCGCTGGA CAAGCACTGG
GAACTGGGCG GCTACTACAG CTACACCAAG TATCGCTACA CGGAATTCTC CGAGCCGGTG
CGCGTTGGCG CGATTACGGT TAACCAGGAA CGGGCCGGCA ACACCCTGCC CTTCGTGCCG
CGCAACCAGT ACGGCGTCTT CGCCGGCTGG AAGCAGGGCG GCTGGCGGGC TCGCGTCTCG
GCCAACACCT GGGGCGAATA CTGGATGGAC AGTGCCAATA CCCAGAAGTA TGAAGGCTGG
GAATGGATCG TTAACGCCTC GCTCGGCTAT CAGCTCCAGC AACATTCGCT GACCCTGAAC
GCCGACAACC TGTTCAACGA GCGCTATGCG GCAGAGGCCA AGAAGGATAC GACCGGCAAG
GTGACCTACA CGGTGGGCGC CCCCCGTGCG CTGATGCTGA CCTACCGCTA CGACTTCCGC
TAG
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| Protein sequence | MKKKRGIAPF GVLCACSLAS TGVLANEASR MLDEVSVTAT RETRSTGEVP QAIAVVGKET
LADKKMFNVK EALQEVPGVL IDSKNGGSDA RLIIRGAGLK AAYGIREIQV LRDGVPLSDP
DSFTRLDFVD TQDIERIEIA KGPGNLFAAG SAGGAIQIIS KSVFDARANN LKIGAGNLGT
QNYHLRVGGM IDDRQALALT VTRREMDNDW RTWNRFETTQ ASLKHGIQLG DGDILESEAS
YAESDMQLPG AVDEAMFQTF KQTGKQNGTS EAWRHSGRYS KVWFLNSRLE VQRGNFTFKP
RIYYNTWYHY HPVTGIINET ESWVSNLGMD LEGNYRHAQG TLVAGITARQ ERAPDSRKYE
YRDVTTGGGG RIVATRSDAK GRLAEIDDAT TLLTGAYIQE SWRPNERWII DAGMRYDIVD
FDDNNQQFRK YDYASGKYVA GAGSTQISKT FYLPAPKIAA SYRLLPGLNL FAMAAQAGQI
PSFSEVSTNP ALEAPVARNY EVGLKARAAD WSFDTSVYVN PVSKDIVQQS NGGVTTYLNA
GKTDKKGFEF AGRYALDKHW ELGGYYSYTK YRYTEFSEPV RVGAITVNQE RAGNTLPFVP
RNQYGVFAGW KQGGWRARVS ANTWGEYWMD SANTQKYEGW EWIVNASLGY QLQQHSLTLN
ADNLFNERYA AEAKKDTTGK VTYTVGAPRA LMLTYRYDFR
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