Gene Daro_2925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2925 
Symbol 
ID3566193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3153318 
End bp3153845 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID637681394 
ProductOmpA/MotB 
Protein accessionYP_286125 
Protein GI71908538 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value0.407293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGA AAATTGCACT AGCCCTCCTT TCCTCTGCGG TCTGCCTGTT GGCCGCCTGC 
TCAACAACCG CTACCGCCCC CACTGAAACG ACCACACCAC AGAAAGCGCC GGATTCCGTT
CGTCCGGTCG CCGCAGCGCC GAGTGGCCTT TCCGCAGCCG ATCTGGCCGC CTTGCGCGAT
CCTTCCAACC CGCTTTCAAA ACGCAGCATC TACTTCGATC TCGACAGCAG TGCCATTAAG
CAGGAATACC GTTCTGTCGC CGAAGCTCAC GGAAAATTCC TCGCGAATAG ACCCGGGGTA
AAGGTCACCG TGCGCGGCAA CACCGATGAG CGAGGCAGCC GTGAATACAA CCTGGCGCTG
GGACAACGTC GTGCCGATGC CACCAAACAG GCACTGAGCG CCTACGGTGT TGTCAGCGAC
CAGATTGAAA CCGTCAGCTA CGGCAGCGAA AAACCGGCTG CTGAAGGCCA TAACGAAGCA
GCCTGGGCAA AAAATCGCCA CGCGGACATT GCCTATCCTG GGGAATGA
 
Protein sequence
MSKKIALALL SSAVCLLAAC STTATAPTET TTPQKAPDSV RPVAAAPSGL SAADLAALRD 
PSNPLSKRSI YFDLDSSAIK QEYRSVAEAH GKFLANRPGV KVTVRGNTDE RGSREYNLAL
GQRRADATKQ ALSAYGVVSD QIETVSYGSE KPAAEGHNEA AWAKNRHADI AYPGE