| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2847 |
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| Symbol | |
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| ID | 3566409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3062612 |
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| End bp | 3064906 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637681316 |
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| Product | PAS |
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| Protein accession | YP_286047 |
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| Protein GI | 71908460 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.445085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0351705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC TCGTTGTCGA TGCCACGCAT CTTTACCGGG ACATCCTGCA GCGGGCATTG
GGCCATTATG CGGATGTCCG GGTCGAACTC GCCTTGTCGC AACAGGAAGC GCGCGAGATT
GTCGCCCGCG AGACCTTTCA TTTCTTCATT ATTTCCGGGC AACTGCCGGA TGGTGATGGC
ATCGAGCTGG CCAAAGCCTT GCGTGCCGAT GGCAGGGCCA AGGCTGAACC GATCGTCTTG
CTGACGTCGA GCGCCAGCTC CGGCCTGGCA ACACAGGCTG AACAAGCTGG TGTGAGCGAG
CTTTTCCGCA AGCAGGATAT CGACGAACTG CTTCGTTTCA TGCGGCATTA CGTTGAGTTG
CTGCAGCCGA TGCGTTGCCG GATTCTTTAT GTTGAGGACA GCAGGGATCA GCGCGCCCTG
CTTGAAGCCC AGTTGCGCGA CTGGGGCATG ACGGTCGATG CGTTTGCCTC GGCTGACGAG
GCGTGGCTGG CTTTTGAAGC CAATGATTAC GATCTGGTGT TGTGCGATGT CGTCCTGGGT
GGGCACATGA CCGGCACGCG CTTGATCAAC CGGATTCGTC GCTTGCCTTT ACCCAAGGGT
GAAACGCCGG TTCTGGCGGT GACAGCTTTT GACAATCCGT TGCGGCGAAT CGAGTTGTTC
CAGCTCGGGG TCGACGATTA TGTGCAGAAG CCGATCCTGG CCGAGGAAAT CCGTGCCCGG
CTTCACAATT TGCTGACCCG CAAGCGTGCC GTCGAGCGCA GCCAGATGTT GCTGGCGGCC
ACGGCGCTTG GCGTCGTTGT TGTCGGTCAG GACGCAGTGA TCGAGTCGAT GGACGATAAC
TCGCTCGACA TGTTCCGGCC TGCAACGCAA CCGGTGCTCG GTCAGCCCCT GTCGATATTG
CTGCCGGAAG AAAAAAATCC GGGCTTGCTC GGTCAGATGA TGCAACGCGT CATGGCCGAA
GAACGTATTT CCGGCCTCAA GGCGGTGGGG CAACGGGGCG ACGGGGAAGA TTTTCCGGTT
GAATTGACGA TCATCGAGAT TAATTCCGGT GATGGCGTAC GTCATTTTGC CCTGCTGGCG
CGTGACATCA GTGAAGAGCA GGCGCTGGCG ACTTATCTGA CCCGGGCTTC GGAGGCGGCT
GAGCGCGCCG AGCAGATGAA GACGGCTTTC CTGGCCAACA TGAGCCACGA GATTCGCACA
CCGCTCAATG CCATTATCGG CATGGCCCAT ATTCTCTCGC GCACCGAACT GGATACTGCC
CAGAAAAAGT ATGTTGGTCA CATCGATGCG GCAGGCGAGC ACCTGCTCGG CTTGATCACC
AACGTACTTG ATATGTCCAA GATAGAGGCC GGCCGGCTGG AGCTGGAAAA TATTCCGCTG
GCCGTTGAGA ACATCGTTTT CGAAGTTCTT TCGATGGTTG CCGATCAGGC TGCGGAGAAG
GGGTTGGACG TGCGGATTGG TGAGTTGGAC GCTCCGTCCG GGCTGGTTGG TGATCCGGTC
AGGCTCAGGC AGGCCTTGCT CAACTATGTT TCAAATGCCA TCAAGTTCAC TGCAGATGGC
AGCATTGATG TTCGGGTTAT TACGCAGGCG GTCAGCGAGG ATTCGGTCCT GCTTCGCTTC
GAGGTAGCCG ATACAGGGAT TGGCATCAGT GCGGAAGCCA GGGATGAGAT ATTTTCGGCC
TTTCGCCAGG CCGATAATTC GACCACCCGC CGTTATGGCG GGACCGGCCT CGGCTTGGCA
ATCACACGCC AGTTGGCTGA GCTGATGGGC GGCGAGGTTG GCGTTTCAAG TACGCCCGGG
CAGGGTAGCC TGTTCTGGTT CACTGCTTCT CTGAAACGCG CTTCTGCGCC GCTTGCTCGG
CCGGCGATCC CCTTGCTATC AGCGGAGAGC GCGGAAGTTG TCTTGGCCAG GGATTTTGCG
GGGTGTCGTT TTTTGCTCGT CGAGGATGAG GTTATCAATC GACATGTGGC CGAGGCCATC
CTTTCGCGCC TGAACTGCGA GATCGATACC GCGAAGGATG GCCGTGAGGC CGTCGATCTG
GCCAGTCGCA ACGACTATGC ACTGATCCTG ATGGACATGC TGATGCCCAA CATGGGGGGG
CTGGAGGCCA CGCAGTGCAT TCGACAACTG CCGGGGGGCG AGAAGGTGCC GATTGTCGCC
CTGACGGCCA ACGCGTTCGC CTACGAAAAG CAGCGCTGCC TGGATATCGG GATGAATGGT
TTTGTGACCA AGCCGATCCG GCCCGAGGTG CTATTCGAGA CCATGCTGCG CTGTCTGAAC
GGCGAAGGGG TTTAA
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| Protein sequence | MNILVVDATH LYRDILQRAL GHYADVRVEL ALSQQEAREI VARETFHFFI ISGQLPDGDG
IELAKALRAD GRAKAEPIVL LTSSASSGLA TQAEQAGVSE LFRKQDIDEL LRFMRHYVEL
LQPMRCRILY VEDSRDQRAL LEAQLRDWGM TVDAFASADE AWLAFEANDY DLVLCDVVLG
GHMTGTRLIN RIRRLPLPKG ETPVLAVTAF DNPLRRIELF QLGVDDYVQK PILAEEIRAR
LHNLLTRKRA VERSQMLLAA TALGVVVVGQ DAVIESMDDN SLDMFRPATQ PVLGQPLSIL
LPEEKNPGLL GQMMQRVMAE ERISGLKAVG QRGDGEDFPV ELTIIEINSG DGVRHFALLA
RDISEEQALA TYLTRASEAA ERAEQMKTAF LANMSHEIRT PLNAIIGMAH ILSRTELDTA
QKKYVGHIDA AGEHLLGLIT NVLDMSKIEA GRLELENIPL AVENIVFEVL SMVADQAAEK
GLDVRIGELD APSGLVGDPV RLRQALLNYV SNAIKFTADG SIDVRVITQA VSEDSVLLRF
EVADTGIGIS AEARDEIFSA FRQADNSTTR RYGGTGLGLA ITRQLAELMG GEVGVSSTPG
QGSLFWFTAS LKRASAPLAR PAIPLLSAES AEVVLARDFA GCRFLLVEDE VINRHVAEAI
LSRLNCEIDT AKDGREAVDL ASRNDYALIL MDMLMPNMGG LEATQCIRQL PGGEKVPIVA
LTANAFAYEK QRCLDIGMNG FVTKPIRPEV LFETMLRCLN GEGV
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