Gene Daro_2777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2777 
Symbol 
ID3566774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2977086 
End bp2980646 
Gene Length3561 bp 
Protein Length1186 aa 
Translation table11 
GC content62% 
IMG OID637681245 
Product2-oxoacid ferredoxin oxidoreductase 
Protein accessionYP_285977 
Protein GI71908390 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.917164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAG CAAATGAATC GTCGAAGCAA AAAATCGTCA ATGCCTTCAC CCAGGAATCA 
GGTGACATCC ATCTGGGCGG TATCGACGCG CTGGTTCGCC TGACGCTGGA TCAGGTCCGT
ACCGACGCCC GGCGTGGCCT GAAGACCGGC ATGTTCGTCT CAGGCTACCG CGGCTCGCCG
GTTGGCATGC TGGATGCAGC GCTGATCAAG CAGCAGAAGA CCCTGCTCCA GAACAATATT
CACTTCGTCG ACGGCATCAA CGAAGACCTC GCCGCCACCG CCGTGTGGGG CACCCAGATG
CTGCACACCG TCGGCCAGCA GAAATTCGAT GGGGTCACCG GCCTGTGGTA CGGCAAGGCC
CCTGGAGTTG ATCGCTCCGG CGATGCGCTG AAGCACGCCA ACTACACCGG CATCGGCAAG
AACGGTGGCG TCCTGGCCAT CGCCGGCGAC GACCCGAGCT GCAAGAGCTC GTCCCTGTGC
TCGCAATCCG AACCCATGCT CTACCACGTC GGGATGCCTT CGCTCTATCC GGCCAACGTC
CAGGAAATCC TTGACCTCGG CCTGCACGGC TACAACATGT CTCGCCTGGC CGGCCTGTGG
GTTGGCATGA AGATCGTCAC CAACGTCGCC GACGGCACCG GCACCGCCAA CATCTCGCCC
GAGCGCCTGG ATTTCGTCAC GCCCGATTTG ACCTTCGACG GCAAGCCCTT CACCCCGAAC
ATGAACCTCG GCATGAACGT GCGCGTCGAG GCGCTGGAGA TGGAGCAGTC GCTTTACACC
CGCCGGCACG AGATCGCCAG GCGCTACGCC CGGGCCAACA ACCTCAACAA CGTCGTTTTT
CCGAACCCGG ATGCCTGGCT CGGCATCATC ACGGCCGGCA AGACCTACAA CGACCTTAAC
CAGGCCTTCC TGGAAATGGG GCTGGATGAC GCTGCGCTCA AGCACTACGG CATCCGCATC
CTGAAGATGG GCATGCTGTT CCCGATGGAG CCGACCGTTG TCCGCGAGTT CGCTCAGGGT
CTGGAAGAAA TTTTCGTCAT CGAGGAAAAG CGCCCCTTCC TCGAAATGTT CGCCAAGGAA
GTCCTCTACG GTACGGCTAA CGCGCCACGC ATCGTTGGCA AGTTCGACGA TGAGGGCAAG
GAACTGCTGC CGCATTACGG CGAATTCGAA TCCGACCTCA TCGTTCGCGC CCTGTTGAAG
CGCCTGTCGC GCAAGACCCG CATCGAATCG GCCGAGAACT GGCTGAAACG CCTCGACGAA
GTGCATTCGC GCAACAAACT GCCGACCTCG GTGCGCACCG CCTGGTATTG CTCCGGCTGC
CCGCACAACA GTTCCACCGT TGCACCGGAC GGCAGCCTCG TTTCGGCCGG CATCGGCTGT
CACACCATGG CCATGTGGAT GGGCCGCAAT GTCGTGATGG GCACCCACAT GGGCGCCGAA
GGCACGCAGT GGATCGGCAT GGCGCCTTTT ACCGAAGCGC AGCACATCTT CCAGAACATG
GGGGATGGCA CCTACGCCCA CTCCGGCAGC CTGGCCATCC GCTACGCCGC TTCGACCGGC
GTCAACATCA CCTTCAAGCT GCTGCGCAAT GCCCATACCT CGATGACCGG CGGTCAGGCC
ATCCAGGGCG AAGTGCCAGT CCAGAACATG GTCGCCGACC TGCTGGCCAA CGGCGTCAAG
AAGATCATCG TCACGACCGA CGACCCGGCT CGTTTCGCTG CCGTCAATCT GCCCGGCAAT
ACCGAAGTCT GGCATCGCGA CCGCCTTGAC GAAGCCCAGC GCGAACTCGC TGCGACACCC
GGTACCACCG TTCTGCTCCA TGACCAGGAA TGCGCCGCCG AACTGCGCCG CGCCCGCAGT
CGGGGCAAGG CCGAGGAACC GGCTGAAGTC ATCGTGATCA ATGAACGCGT CTGCGAAGGC
TGCGGCGATT GCGGCGAAAA ATCCAACTGC ATGAGCGTTG AACCGGTGGC CACCGAGTTC
GGCCGCAAGA CGCGCATTCA CCAGTCGTCG TGCAACAAGG ACTTCAGCTG CGTCAAGGGC
TTCTGCCCAT CATTCCTGAC CGTCACGCCG AATCCGGCAC CAGCGACCGA TGGCAAGAAA
CCAAAGAAGG GCCGCATCCC GGCGCTCGAG CGCGAACTGC CGACCCCGGT CAACAAAATC
GATGATTCCA TAGGCGTCGG TATCCACGTC ATGGGTATCG GTGGCACCGG TTCGGTCACC
GTCGTCGCTA CCTTGGCCAA CGCCGCTCGC CTCGAAGGCA AGCATGTCAT CGGCCTCGAC
CAGACCGGCC TGGCCCAGAA GGGTGGGGCG GTGATCTCCG ATATCAAGAT CACCCACGCA
CCGTTCAAAG GCTCGAACAA GATTTCCGAC GGCCGGGCCG ACCTCTATCT GGGCTTCGAC
ATCCTGAATG CGACGGACCC GAAGAACCTC GACAAGTGCG GCAAGGAACG CACCATCGCC
GTCGTGTCCA CGACCCAGAC GCCGACCGGC CAGATGGTGA CCAATCGCCA CAATCAGTTC
CCGGCCATCA ACGGCTTGGT TGCCGGCATC AACCGGGTCA GCCGCGAGGA ACACAACGTC
TTCCTCGACG GACAGGCGAT GGCCGAAGGG CTGTTCGGCG ATGCCATGGC AACCAACAAC
TTCATGGTCG GTGTCGCTTT CCAGGCCGGC ACCATTCCGC TCAAGGCCGA GTCGATCGAA
CAAGCCATCA AGAACTCTGG TGTGGCGGTC GACATGAGCC TGGCGGCTTT CCGCTGGGGA
CGCATGGTCG TTGTCGACCG TAGCTTCGTC GAAGCCGAGA TCGCCAGGCA CAAGGCCGGC
GGCACCGTCA TCGCGCTGCA CCAGGCGCCG AAGCTGACCG CGGCAGCCCG CGCCATCGTC
GATCCCATCG GTGCCACGGG GGAAACGAAG CGTCTGGCCG AGATTCGGGT GCCGGAACTG
ATCGCCTTCC AGGACGAAGC TTATGCCCAG CGCTACGCCG ACGTACTCCA GCGGGTCGTC
GCTGCCGAGC AGCGTGTCGG CACCGATGGT CAGTTGGCGG CCGCTGCCGC CCGCTACCTG
TACAAGCTGA TGGCCTACAA GGACGAATAC GAAGTCGCCC GCCTGCATAC CGATCCGGCT
TTCCTGGCCG AACTCGATGC GCAGTTCCCG CATGGCTACT CGGTGAAATA CAACCTGGCG
CCGCCGTTGC TGGCTGAGCG TGACCCGCAG ACCGGGCATC TCCAGAAGAA GCAGTACGGT
CCGTGGATGA CCAAGGCGTT CAGGAAGCTG GCCGGTTTCA AGGGGCTGCG CGGCGGTTCG
CTCGACCTGT TTGGCAAGAG CGAGGAGCGC CGGGTCGAAC GTCAGTTGAT CGACGAATAC
ATCGCCCAGC TCGACGAGAT CGTCGCCCAG TTGACTTCGG CCAACCACGA AGCGGCCATC
GCCCTGGCCA GCGTGCCCGA CGAGATTCGC GGTTACGGGC ATGTCAAGGA AAAGAGCCTG
GCGGCTGCGA AAGCCTTGCA GGCGGAACGT CTGCAGGCCT TCCTGACGGC CAGACCGGTC
ATCGAAATCA AGACCGCTTA A
 
Protein sequence
MAAANESSKQ KIVNAFTQES GDIHLGGIDA LVRLTLDQVR TDARRGLKTG MFVSGYRGSP 
VGMLDAALIK QQKTLLQNNI HFVDGINEDL AATAVWGTQM LHTVGQQKFD GVTGLWYGKA
PGVDRSGDAL KHANYTGIGK NGGVLAIAGD DPSCKSSSLC SQSEPMLYHV GMPSLYPANV
QEILDLGLHG YNMSRLAGLW VGMKIVTNVA DGTGTANISP ERLDFVTPDL TFDGKPFTPN
MNLGMNVRVE ALEMEQSLYT RRHEIARRYA RANNLNNVVF PNPDAWLGII TAGKTYNDLN
QAFLEMGLDD AALKHYGIRI LKMGMLFPME PTVVREFAQG LEEIFVIEEK RPFLEMFAKE
VLYGTANAPR IVGKFDDEGK ELLPHYGEFE SDLIVRALLK RLSRKTRIES AENWLKRLDE
VHSRNKLPTS VRTAWYCSGC PHNSSTVAPD GSLVSAGIGC HTMAMWMGRN VVMGTHMGAE
GTQWIGMAPF TEAQHIFQNM GDGTYAHSGS LAIRYAASTG VNITFKLLRN AHTSMTGGQA
IQGEVPVQNM VADLLANGVK KIIVTTDDPA RFAAVNLPGN TEVWHRDRLD EAQRELAATP
GTTVLLHDQE CAAELRRARS RGKAEEPAEV IVINERVCEG CGDCGEKSNC MSVEPVATEF
GRKTRIHQSS CNKDFSCVKG FCPSFLTVTP NPAPATDGKK PKKGRIPALE RELPTPVNKI
DDSIGVGIHV MGIGGTGSVT VVATLANAAR LEGKHVIGLD QTGLAQKGGA VISDIKITHA
PFKGSNKISD GRADLYLGFD ILNATDPKNL DKCGKERTIA VVSTTQTPTG QMVTNRHNQF
PAINGLVAGI NRVSREEHNV FLDGQAMAEG LFGDAMATNN FMVGVAFQAG TIPLKAESIE
QAIKNSGVAV DMSLAAFRWG RMVVVDRSFV EAEIARHKAG GTVIALHQAP KLTAAARAIV
DPIGATGETK RLAEIRVPEL IAFQDEAYAQ RYADVLQRVV AAEQRVGTDG QLAAAAARYL
YKLMAYKDEY EVARLHTDPA FLAELDAQFP HGYSVKYNLA PPLLAERDPQ TGHLQKKQYG
PWMTKAFRKL AGFKGLRGGS LDLFGKSEER RVERQLIDEY IAQLDEIVAQ LTSANHEAAI
ALASVPDEIR GYGHVKEKSL AAAKALQAER LQAFLTARPV IEIKTA