| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2754 |
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| Symbol | |
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| ID | 3566808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2950191 |
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| End bp | 2954018 |
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| Gene Length | 3828 bp |
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| Protein Length | 1275 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637681221 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_285954 |
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| Protein GI | 71908367 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.727357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTT TGTCAAAGAT GGCCTCCCCG TCGTCAGCCC TGAGTTTCCG CAAGCAGATC
ATCCGGCCAG TGCTGGTCTC CACCATTGCG CTGGCCATCC TGATATTGCT TAGCTTCGCG
GCCTATCTGG ATTGGCGCGA AAGGGAGCGC ACCGCGCTCG CAACCCAGCA GGTCGAGCGC
ATCTGGCAGG GTATGGTCGA TAATAATGGC CGCTACTTGC GCTGGATGGC GACACAGGTC
GCCAATGACC ACCGGTTTGT CGAAGCAATG CAGCGGGGCG ATCGGGACGC TTTGCTGGCC
TTGGCAGGAC CCAGGTACCG CGAATTGCAT GCCCAGTTTG ACCTTAGTCA CTGGTATTTC
ATTACGCCAG ACCGCAAGGT GCTTCTCCGT GTCCATGATC CTGAGCGGAG TGGGGACGAG
GTGCGCCGCA AAGGCTTGCT GGATGCCGAG GCGAGCGGCC AGATGACGAC CGGCCTCGAA
CTTGGCACAA CTTCCGTTTT TACGCTCAGG CAGGTCATGC CGTGGCGTGT CAATGGCAAT
GTGATCGGCT ATGTCGAGAT GGGCATGGAG GTTGAATCCT TTGCCCGCGA GATCAAGCGC
CTGACCGGTC TGGATGTGCT GACGGCGGTG CATAAGGCCT ATTCATCAGC CGAAGCTTTC
GCTAATGGCA AGAAGGCCTT TGGCCTATCG GGAAACTGGG GTGACCATGC CGAGATTGCC
CTGCTCAGCC AGTCATTCCC TGGGGTTCCG GCATCGCTGA TCGCCTCTTG GCAGGGGTTT
GTCCGGGGTA GTGACCCAGG CGTCTTCGAC GTGATCAAGG GCGAGCGTAT CTGGTCGGCA
AAACTGATTG CCTTGCTGGA TAACGATCAG CATCCGGTCG CCTCAATGGC CATTTTGCGG
GATATCGCGG CTGATCGGGT ATCGCGTACC CAGTTGCTCT TTTTTGTTGG CACGGGGTCC
GCGCTTTTCA TCGTGCTGCT GATGCTTGCC CTCCACCGTC GCGTTGGGAG CGTCGAGCAA
CATGTCATCC AGGCCAATGA CGCACTTGCG GCATCCAATC AACGCTTCCG CGATTTCTCG
GAGAGCTCGG CTGACTGGCT CTGGGAAACG GACGCCAATC TTCGTTTCTC TTATTTTTCA
GAAAACCTGC AGCGCATTTG CGGTATCGAC CCCCAAAAGG TCTTGGGCAA GGCCCGAAGC
GAGTTGTGGC TTAACGATGA GATCAATAAA CCGGACGCGC TGGCGGGGCA CCTGGCTGTT
CTTGAAAACC GGGAAGCGTT TCGTGATTTT GAATACTGTC TCCTGAATGA CCGGGGGGAA
CACCTGTGGC TTCTCGCCAG CGGTATTCCG TACTTCGACA AGGAGGGGCA CTTTGCGGGC
TATCGAGGTA TCGGACAAAA CATCACGGTT CGGAAAGATC TGGAATTGGC CGCTGAGAAA
TCGGCCAAGC TGCTGCGGGA GGCCGTTGAG AACGTCTCGG TCGGCTTCAC GATCTACGAT
GAAGAAGACC GGCTGGTTAT TTGCAACGAA ACCTATCTGG ATATTTATTC CGACAGCAGC
GACCTGATCG TGCCTGGCAT GCACTTCGCG GACATCATTC GCAAAGGTGC CGAGCGCGGC
CAGTATCCTG AAGCTCAAGG CGACATCGAC GGCTGGGTCT GCAGTCGTGT GGCACAGCAC
CAGCATCCGG ACGGGCTGGC CATTGAGCAG GAGCTGAATG ATGGGCGCTG GCTGCTGATT
ATCGAAAATC GCACCCCCAG TGGCTACATC GTCGGCAACC GGATCGACAT TACTGCCCGC
AAGCAGGCTG AAAGGCAGTT GCTTTTGTTG TCCATGGCGG TCGAGCAGAG TACCGAGGGC
ATTCTTATCA CCGATGTCGA TGCCAATATC GAGTATGTCA ATGAGGCTTT CGTCCGTATC
TCGGGCTTCA GTCGCGAAGA GGCGATTGGG CAGACGCCGC GCATCCTGGA TTCCGGTCTG
ACGCCGAGAG AAACCTATGC CGAAATGTGG GCGGTGCTGT CGCGTGGCCA GCTTTGGCAG
GGCGAGCTGA TCAACAAGCG CAAGAGCGGT GAAATCTACA CCGAACGCCT GACGATCATG
CCCATGCGGC AGGATGGTCG AGTCACCCAC TACGTTGCAG TCAAGGAAGA CGTCACCGAA
AAGCGCCGCA ACGCCGATGA ACTCGAACGC CACCGCCATC ATCTGGAGGA ACTGGTCGCC
GAGCGCACTG CTGAGCTGGC CGTGGCGCAT GAGGCAGCCG AAGCTGCCTC GCGGGCCAAG
AGCGCATTCC TGGCCAACAT GAGCCATGAA ATCCGGACGC CGATGAATGC CATCGTCGGC
CTGACTTACA TGTTGCGGCG AACGATTACC GACTCGGGCC AAGCGGACAA GCTGGGCAAG
ATTGCCGCCA GTGCCGATCA CTTGCTTGGC GTGATCAACG ACATCCTTGA TATTTCCAAG
ATTGAAGCGA ACAAGCTGGC GTTGGACCAG TCGGAGTTCA ATCTGGAGGA ACTCCTGTCG
CGCGTCACGT CAATGGTGAT TGACCGGGTT CGCGAGAAAA GGCTGGAGCT GATTATCGAT
ACCGATGCCA GCCTGGGTTT CCTGATGGGC GATGCGACAC GTCTTGGCCA GTCGCTGATC
AACTACCTCG GCAATGCAGT CAAGTTCACC GATTACGGCA GCATCGTCTT GCGTGCCCGC
CTGGTCGAGG AAAGCAGCAA CGATGTGTTG ATCCGGTTTG AAGTCGAGGA TACCGGGATC
GGCGTTGCCC CGGAAAACCT GCCCCGCCTG TTCCAGGTGT TCGAGCAGGG GGATAGCACA
ACAACGCGCC GCTACGGCGG TACCGGCCTT GGCCTGGCCA TCACGCGCCG CTTGGCCCAG
TTGATGGGCG GTGAGGCCGG GGTCGAGAGC ACTTTGGGGG TTGGCAGTAC TTTCTGGCTG
ACGGCTCGAC TGGGCCGGGT CCGGGCAGCG ACCGGACGCC ATCGCATTCC CAGCCTGCGT
GGCAAGCGGG CGCTGGTCAT TGATGACATG CCGGTGACGC GTCTGGTCCA GTCCCAGTTA
TTGCGGATGA TCGGTCTGGA AGGTGAAGGT GCTGCGGGGG GGGCGGTGGC ATTACAGGAA
ATCGAGGCGG CCGAGCGGGA AGGAAAACCC TACGATCTCG TTCTGGTTGA TCTGCTGATG
CCCGGCATGG ACGGTTTCGA AACCTTGGCC AGATTGCGCG CCCTGCCTTT GCGGCAGCAG
CCGCTGGCCA TCCTGGTGAC CGCATCCAGC GATCCCGAGA TCATTGAAGA TGCCACCCGG
ATGGGTTTTG CCGAAGCGCT GCTCAAGCCC TTGTCGCCTA GTATGCTCAA CGACTGCCTG
GTCCGGCATC TCGCCGATAT CCCGGGGCAA ACCGGTGGCA TGCCGCTTGC CGATAAACCT
GCCGGATCGG ATGCCGAATC AATTCTGAAA GCCGATTTCA GCAGTGCGCG GATTCTTCTG
GTCGAGGATG AGCCGATCAA CCAGGATGTC GCGCTGGCCA TTCTTGAAGA AATTGGCTGG
AAGATCGACG TGGCGGCGAA CGGCAGGGAG TCGCTGGCTT TGGTTGAGGC GAACGATTAT
CAGGTCGTGT TGATGGACAT GCAGATGCCG GTCATGGACG GTTTGGCCGC GACTCGCCAG
ATCCGCCGGC TCCCTGGCCA CGAGACGCTA CCGATCATTG CCATGACGGC CAATGCATTC
AGCGAGGATC GTGACCGATG TGTTGAGGCG GGCATGAACG ATTTTCTGTC CAAGCCGGTG
GAGCCTGAGG TTCTTTACGC GATGTTGCTG AAATGGCTCA GGCACTGA
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| Protein sequence | MSFLSKMASP SSALSFRKQI IRPVLVSTIA LAILILLSFA AYLDWRERER TALATQQVER
IWQGMVDNNG RYLRWMATQV ANDHRFVEAM QRGDRDALLA LAGPRYRELH AQFDLSHWYF
ITPDRKVLLR VHDPERSGDE VRRKGLLDAE ASGQMTTGLE LGTTSVFTLR QVMPWRVNGN
VIGYVEMGME VESFAREIKR LTGLDVLTAV HKAYSSAEAF ANGKKAFGLS GNWGDHAEIA
LLSQSFPGVP ASLIASWQGF VRGSDPGVFD VIKGERIWSA KLIALLDNDQ HPVASMAILR
DIAADRVSRT QLLFFVGTGS ALFIVLLMLA LHRRVGSVEQ HVIQANDALA ASNQRFRDFS
ESSADWLWET DANLRFSYFS ENLQRICGID PQKVLGKARS ELWLNDEINK PDALAGHLAV
LENREAFRDF EYCLLNDRGE HLWLLASGIP YFDKEGHFAG YRGIGQNITV RKDLELAAEK
SAKLLREAVE NVSVGFTIYD EEDRLVICNE TYLDIYSDSS DLIVPGMHFA DIIRKGAERG
QYPEAQGDID GWVCSRVAQH QHPDGLAIEQ ELNDGRWLLI IENRTPSGYI VGNRIDITAR
KQAERQLLLL SMAVEQSTEG ILITDVDANI EYVNEAFVRI SGFSREEAIG QTPRILDSGL
TPRETYAEMW AVLSRGQLWQ GELINKRKSG EIYTERLTIM PMRQDGRVTH YVAVKEDVTE
KRRNADELER HRHHLEELVA ERTAELAVAH EAAEAASRAK SAFLANMSHE IRTPMNAIVG
LTYMLRRTIT DSGQADKLGK IAASADHLLG VINDILDISK IEANKLALDQ SEFNLEELLS
RVTSMVIDRV REKRLELIID TDASLGFLMG DATRLGQSLI NYLGNAVKFT DYGSIVLRAR
LVEESSNDVL IRFEVEDTGI GVAPENLPRL FQVFEQGDST TTRRYGGTGL GLAITRRLAQ
LMGGEAGVES TLGVGSTFWL TARLGRVRAA TGRHRIPSLR GKRALVIDDM PVTRLVQSQL
LRMIGLEGEG AAGGAVALQE IEAAEREGKP YDLVLVDLLM PGMDGFETLA RLRALPLRQQ
PLAILVTASS DPEIIEDATR MGFAEALLKP LSPSMLNDCL VRHLADIPGQ TGGMPLADKP
AGSDAESILK ADFSSARILL VEDEPINQDV ALAILEEIGW KIDVAANGRE SLALVEANDY
QVVLMDMQMP VMDGLAATRQ IRRLPGHETL PIIAMTANAF SEDRDRCVEA GMNDFLSKPV
EPEVLYAMLL KWLRH
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