| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2706 |
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| Symbol | |
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| ID | 3566992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2898854 |
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| End bp | 2899687 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637681173 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_285906 |
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| Protein GI | 71908319 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.000109995 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000842168 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCCAG ACCAATACTG CCAGGAGAAG TGCGCAAAAA GCGGCTCCTC CTTCTACTAC
AGCTTCCTGT TCCTGCCCTT GCAACGCCGG CGAGCCATCA TGGCGCTCTA CGCCTTCTGC
CGCGAAGTCG ATGACGTCGT CGATGAATGC AACGACGTTT CGATCGCCTC GACCAAGCTT
GCCTGGTGGC GCCAAGAGAT CGAACGCGTT GCCGAAGGCA AGCCGCAACA CCCGGTCGGC
CTAGCGCTGG CGGGGCTCGA CAAGAGCATC AACCTGCCGA AAGAGCAGTT GCTGGAAATC
ATCGACGGCA TGGAGATGGA CCTCACGCAG TCGCGCTATC TCGACTTCAA GGGCCTGTCG
CTCTACTGCT ACCGTGTCGC CAGCGTCGTC GGCCTGCTGG CTGCCGAGAT CTTCGGCTAC
ACCGATCGCC AGACACAGAA ATACGCCCAC GATCTGGGCA TGGCTTTCCA GCTCACCAAC
ATCATTCGCG ACATCGGCGA AGATGCCCGG CGCGGCCGCA TCTACATCCC GATGGACGAG
CTCAAGCAGT TCAACGTGCC AGCTGCCGAC ATCCTGAACG GCAAATACTC GGACAACTTC
ACGGCGCTGA TGCAGTTCCA GTATGAGCGC GCTGAGAAGT ACTACGAGCA GGCGTTTGCC
CAATTGCCGG CCGTCGATCG CAAGAACCAG CGCCCCGGCC TGATCATGGC GGCGATCTAT
CGCACCGTGC TCGACGAGAT CAAGCGCGAG AATTTCCAGG TGCTGCACCA GCGCATTTCG
CTACCGCCGA CGCGCAAGCT GTGGCTGGCT GCCAAGACCT GGATCAAGGG CTGA
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| Protein sequence | MNPDQYCQEK CAKSGSSFYY SFLFLPLQRR RAIMALYAFC REVDDVVDEC NDVSIASTKL
AWWRQEIERV AEGKPQHPVG LALAGLDKSI NLPKEQLLEI IDGMEMDLTQ SRYLDFKGLS
LYCYRVASVV GLLAAEIFGY TDRQTQKYAH DLGMAFQLTN IIRDIGEDAR RGRIYIPMDE
LKQFNVPAAD ILNGKYSDNF TALMQFQYER AEKYYEQAFA QLPAVDRKNQ RPGLIMAAIY
RTVLDEIKRE NFQVLHQRIS LPPTRKLWLA AKTWIKG
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