| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2685 |
|---|
| Symbol | |
|---|
| ID | 3567027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2881091 |
|---|
| End bp | 2881756 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637681151 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_285885 |
|---|
| Protein GI | 71908298 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 0.378433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0016423 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAC GCTACGCCCT CTCAGCCACT GCCGGCCAAT TGATCGAACA CTTTCAGCTG
CTCTCATGCC CTGATTATGA GGTGCGCTAC AACATCGCGC CGACCAGCAT CATCCCGGTG
ATTCGCTACA AACCTGACGC TGGCAGGGTT GGCCAACTGG TTAAATGGGG CCTGGTGCCA
TCATGGGCAA AGGATGCGAG TATCGGCGCC AAGCTGAATA ACGCACGCGG CGAGACGGTA
GCCGAGAAGC CATCCTTCCG GACAAGTTTC GCCAAGCATC GCTGCCTGAT CCCGGCTAGT
GGGTTCTATG AGTGGAAAAC GGTCGAAGGA AAGAAACAAC CGTATTACAT CTATCCGACT
GACGGTCTCT TTGCCTTTGC CGGGCTGCTC GCCGCGTGGA AAGCCCCAGA CGGACAGACG
CTCGTTACGA CCTGCATCAT TACCACCGAG CCAAATGAAG TGATGGTGCC GATCCACGAC
CGCATGCCGG TAATTTTGGG GGCGGATCAG TACGACGCTT GGCTTGATCC GCTAAATCAC
GATGTTGAAG CTCTGAAGCA GATGATCAGG CCATGTAGTG CCGAGAGGAT GACTGCTTAT
CCGGTGAGTC CGCTAATTAA CAATGGCCGA GCTGAAGGGG GGGGTATCGC TGAAATTGAT
GAATGA
|
|---|
| Protein sequence | MCGRYALSAT AGQLIEHFQL LSCPDYEVRY NIAPTSIIPV IRYKPDAGRV GQLVKWGLVP
SWAKDASIGA KLNNARGETV AEKPSFRTSF AKHRCLIPAS GFYEWKTVEG KKQPYYIYPT
DGLFAFAGLL AAWKAPDGQT LVTTCIITTE PNEVMVPIHD RMPVILGADQ YDAWLDPLNH
DVEALKQMIR PCSAERMTAY PVSPLINNGR AEGGGIAEID E
|
|---|
| |