Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2627 |
Symbol | |
ID | 3567257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2826963 |
End bp | 2828162 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637681091 |
Product | secretion protein HlyD |
Protein accession | YP_285827 |
Protein GI | 71908240 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 80 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.524182 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACCC GTACCCTGAC CGCCGCCGCC CTGGTGCTTT TGCTGACGCT GGCCGCCTGC GGCCGCAATG CCCCCGAGGC CAAGCCGGCA ACCGAAAGCC AAACCGTCGC CCCGGAAAAG ACCGCTGCCA ACGACAAGGA AGCAGCCAGC GAAGCGCCGG AAGCCGGTCA AATCCATCTG ACCGAGGCGG ACATCAAGGC GGCCGGCATC CGCACCGAGG AAGCCAACGA AGCCGAAGTC CATGAGCGCA TCGCCGTCAC GGCCACCATT CAGGCCAACC AGGACCGGCT GGCGCATGTC GTCCCACGGG TGCCGGGCCG CCTCGTCGGC ATCACGGCCA AACTGGGCGA CCGGGTCAAG GCCGGGCAGA CCCTGGCCAG CCTGGACAGT ATCGAGATCG GTGAAGCTCA TTCCGCTTAT CTTCAGGCCG ACAGCCAGTT CCGGCTGGCC CAAGCCGATT TCGAGCGCGC CGAAAAGCTC CATGCGGAGC AGATCGTGCC GGAAAAGGAC TATCTGCGCA GCCGTTCTGA ACTGGAAAAA GCCCGCGCCA ACCTGCGGGC GGCCACCGAC AAGCTGCGTC TGATGGGTGT GCCGCCGGCC CGCTCGGAAT CGGCCGTCTC GGTCTTCCCG GTTAGCGCGC CCTTTGCCGG CACGGTGATC GAGAAGACGG CGGTGCTGGG TGAGCTTGCC CAGCCGGACA AGTCCCTGTT CACCGTGGCC GATCTGTCTG TCGTCTGGAT CGAGGCCAAT CTGTTCGAGA AAGACCTCGG CAAGATCAAG GTCGGCGCCA CGGTCGGCGT ATCGGTTGCC GCCTATCCCG ACGAGTTGTT CAAGGGGCGC CTGACCTACA TCAGCAGCGT CATGGATAAG GAAAGCCGGA CGATCAAGGC TCGCGTCGAA GTTGCCAATG CCGACGGCCG CCTGAAGCCC GACATGTTCG CCAACGCCGC CATCGACACC GCCACGGCGG GCAAGGCGCT GACCGTGCCG ACGAGCGCCG TGCTCCTGCT GGAGGGAAAG AAGACCGTCT TCGTTCGTGA GAAGGAAGGG TTCGAGAAAC GGGAAGTCGA GTTGGGCGAC AACCTCGGTG GCCGTTTCGT GGTCAAGGAA GGCATCGAGG CCGGTGAGGC GGTCGTGGTC GAAGGCGCCT ATGCGCTCAA GGCGCGGCTG CTGAAATCCA AAATCGGCGA TCACGACTAA
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Protein sequence | MMTRTLTAAA LVLLLTLAAC GRNAPEAKPA TESQTVAPEK TAANDKEAAS EAPEAGQIHL TEADIKAAGI RTEEANEAEV HERIAVTATI QANQDRLAHV VPRVPGRLVG ITAKLGDRVK AGQTLASLDS IEIGEAHSAY LQADSQFRLA QADFERAEKL HAEQIVPEKD YLRSRSELEK ARANLRAATD KLRLMGVPPA RSESAVSVFP VSAPFAGTVI EKTAVLGELA QPDKSLFTVA DLSVVWIEAN LFEKDLGKIK VGATVGVSVA AYPDELFKGR LTYISSVMDK ESRTIKARVE VANADGRLKP DMFANAAIDT ATAGKALTVP TSAVLLLEGK KTVFVREKEG FEKREVELGD NLGGRFVVKE GIEAGEAVVV EGAYALKARL LKSKIGDHD
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