Gene Daro_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2602 
Symbol 
ID3567291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2802629 
End bp2803507 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content59% 
IMG OID637681066 
Productphosphonate-binding periplasmic protein 
Protein accessionYP_285802 
Protein GI71908215 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGT CAGATCGACC TCTTTTGCGC GCCACCCGGC GCCGCCTGCT GCTTGCCCTG 
GCTGCTCTGC CAGCTTGGCC GGCGACGGCT GCCAACGGTG ATGGTGCGAT TGTCCGTATC
GGCCTGACAC CGGTCTTTCT CGACGACCAG GTGAGCTTTC TCGGTAAATG GAGATCCTGG
CTGGAACAGA AACTGGGCCG CTCTGTGGCC TTTGTCCAGC GCGGCAATTA TCGTGAGATC
ATTGATTTGT TGCGTTCCGG GAAGATCGAT TTTGCCTGGT TGTGCGGCTA CCCGTACATA
CGCCATCGCC ATGAGTTTCG CCTGGTCGCA GTGCCTTTGT GGCGCAACCA GCCGCTCTAC
CAGTCCTACC TCATCGTGCC GTCTGACGAC CAACGCACGA AGACCATTGC CGACCTGCGC
GGCAAGGTCT TCGCTTATTC CGATCCGGAT TCCAATTCCG GGTATCTCTA TCCGCAATAC
GCATTGACGA TGCTGGGAGA AAAGCCGTCG ACTTTCTTTT CGCGCACTTT TTTCACCTGG
GCTCACCGCA AGGTTGTCGA GGCTGTTGGT GTCGGGCTGG CTGACGGTGG CGCGGTCGAT
GGCTACGTTT GGGATACGCT GGCCGAAGTG CGCCCTGATC TGACGGCGGC GACCCGAATC
ATCGATCGTT CGCCACTGCT TGGCTACCCG CCGTTTGTTG CGCGCAGTGA TATTCCCGCC
AAAGAAATGG AACAGTTCCG GCAGGTTTTG CTTGGTATGG CGGGCGACCC GCAGGGGGGC
GAATTGCTGG GCCGCTTGCG ACTGGATGGC TTCGTGAGCG GATCGCCAGC CTTGTTCGAT
GGCATTGCCC AGATGGCAGC CAAGGTCGGC CGGAAATGA
 
Protein sequence
MSASDRPLLR ATRRRLLLAL AALPAWPATA ANGDGAIVRI GLTPVFLDDQ VSFLGKWRSW 
LEQKLGRSVA FVQRGNYREI IDLLRSGKID FAWLCGYPYI RHRHEFRLVA VPLWRNQPLY
QSYLIVPSDD QRTKTIADLR GKVFAYSDPD SNSGYLYPQY ALTMLGEKPS TFFSRTFFTW
AHRKVVEAVG VGLADGGAVD GYVWDTLAEV RPDLTAATRI IDRSPLLGYP PFVARSDIPA
KEMEQFRQVL LGMAGDPQGG ELLGRLRLDG FVSGSPALFD GIAQMAAKVG RK