Gene Daro_2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2586 
Symbol 
ID3567426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2786011 
End bp2787882 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content49% 
IMG OID637681051 
Productsensor histidine kinase 
Protein accessionYP_285787 
Protein GI71908200 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.209829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.69032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTA CAAAAAAGCT TCTTTTCATC ACGCTATTGG TCACCGCACT CTCTGTGGTA 
ATCACTATTG TTCTGACCTG GAGCGCTGCC ACCGATGCGC TTCACGGATT AGAGGGCAAG
CGCGTAACTG ATAGCTTGGA GCGGGAGGCA AGAATACTCC AGAGCACCAT CAACATGGTG
AAGAGCGATT TATCGATGCT CGCAGATGGA AGTGCGCGAT ACATGATTGA GGAGAATGCC
GAACCTAGTG TTGACGGCCT TCAAAAAGTT GCTGAACAGT TCGACATTAT GATGCGGGAA
CGGCACGCCT ATAGACAAGT GAAGATGCTA TTGGACTCTG CCACAGGAGC GCATCGCGTA
CTGGTTAGTT TGCGGAACGA TAACGTAGTT CACACCATGG TGGATCCGCC AGTTGCAAAT
TGGAATTTTG AGTCATTGTT GGCAGAAAAG CAGGGGCTAA GAAATTTCAA TGAACAAACC
CGAAACCTGA GCGATGAAAC AAGTGGAGAA AGGGTGCTGT TTGCCAGCAT CCCGGTACGA
GGCAAGGATC GCAATGTGAT CGGCGCAATT GCTGTGGTTG TTGCCATCGA TCAAGTGTTT
AGAACACTGG GTAAAACCCA TGATGGAATT GCTTACTGGA TTGCTGATAG TGCTGGTCAA
TACCTTTACC AGTCCCGTCC GGAGGCGTCG GGCAGTTCTC CTCAAAAGGC TGCAAATGCA
ATCCGCGATT TCAAGTTGAG TCATACCTGG GATCACGTTT TGTCTGGGGC TCAGCCTCAG
CTAATCATGG AATTTCCCGC GATTACAACG ATGTTGGGAA TTCGTCGTGC GACTTTGAAT
GTTGGTGAAG GGAATGAAAT TGAGAATGTA TTGGTGGTAG GAGGGGTGAT ATCTCTAGTT
GAACTGGAGA TCAAAGCCGC TGCGCTTCAA AGGCAACTTG CTATTGCGGT TGCGAGCATC
GGACTCCTGA TGGTATTGAC GCTGTTTGTC TCTACAGGTC GGCTCCTGAG GCCCATTGAT
GTTCTAACCA AGGCGGCTAA CCGCATTGCC TCAGGTGACC AGAATATTGT GATCCCGACG
AACAACAATG ATGAAATCGG GACGCTCAGT CGGGCAATGA TGCGGATGGC CGAACAATTG
CGCCTAGCCG GAAAAAACTC CGAGCAAAGC GCCATGGGAC AAATGGCCTC AATGATTGCT
CATGACCTAC GTAACGCGCT GTCATCGGTA AAAATGAATC TGCAGATACT CGACGAACAC
CATCGCAAGG AGGGAGATAT GCAAATAGAA AATTGTGAGA TCGCCCTCGG GCAGGTTCGT
TACATGGAGA CAATTCTGAA TGACATGCTG ACTTATGCGC GCCCAGGTAC TGCAGAATTC
GACTGGGTAG ATCTGGGAGA TACGCTCAGG GCAGCGTCGG TATCCCTCTT GCCAGAAATA
ACGCGGAAAT CCGTAGAAGT CCGTATGGAA GGGGAAGAAA AACTGCCCAC GATCATGGCT
GACCGAAATA AATTATTACA GCTGTTTCAG AATGTACTCG GGAACGCTAT TTATGCCGTA
CCTGAGTGGG GGCTCATAAT AATTCGGACT CGCTGCCTCC TACATGAATC ACAGCCATCT
GTAGAAATAC GCTTTGAAGA TGATGGTCCG GGTATTTCCC CCCAAATTGC TGACAAGGTA
TTTGATCCTT TCTTCACTAC TAGCTCCAGA GGAACTGGAT TGGGACTGGC AATAGTGCAG
CGTATCGTCG CTCAACACGG AGGGCAGGTA TATCTGGATT CGGAACGAGA CCACGGAACT
ACAGTTGTTG TCGTTCTCCC CCTAACCCAA GAAGGGCCGG ATGACTCCCC CGAAAGTGCA
GAACTTAGCT AA
 
Protein sequence
MSITKKLLFI TLLVTALSVV ITIVLTWSAA TDALHGLEGK RVTDSLEREA RILQSTINMV 
KSDLSMLADG SARYMIEENA EPSVDGLQKV AEQFDIMMRE RHAYRQVKML LDSATGAHRV
LVSLRNDNVV HTMVDPPVAN WNFESLLAEK QGLRNFNEQT RNLSDETSGE RVLFASIPVR
GKDRNVIGAI AVVVAIDQVF RTLGKTHDGI AYWIADSAGQ YLYQSRPEAS GSSPQKAANA
IRDFKLSHTW DHVLSGAQPQ LIMEFPAITT MLGIRRATLN VGEGNEIENV LVVGGVISLV
ELEIKAAALQ RQLAIAVASI GLLMVLTLFV STGRLLRPID VLTKAANRIA SGDQNIVIPT
NNNDEIGTLS RAMMRMAEQL RLAGKNSEQS AMGQMASMIA HDLRNALSSV KMNLQILDEH
HRKEGDMQIE NCEIALGQVR YMETILNDML TYARPGTAEF DWVDLGDTLR AASVSLLPEI
TRKSVEVRME GEEKLPTIMA DRNKLLQLFQ NVLGNAIYAV PEWGLIIIRT RCLLHESQPS
VEIRFEDDGP GISPQIADKV FDPFFTTSSR GTGLGLAIVQ RIVAQHGGQV YLDSERDHGT
TVVVVLPLTQ EGPDDSPESA ELS