Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2549 |
Symbol | |
ID | 3567525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2747259 |
End bp | 2748728 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637681016 |
Product | peptidase C14, caspase catalytic subunit p20 |
Protein accession | YP_285752 |
Protein GI | 71908165 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 0.98894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.217885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGGC GGCTAACCGC CCTCGTCATC GGCAACGGCG CCTACGAGGA TGCCAGCGAA CTCGAAAACC CCGTCAACGA CGCCGAGGAT GTTGCCGCAA AGCTCGAGGC TTGTGGCTTC TCGGTGATCA AAGAAATCGA CTGCACAGCC GCTGCAATGG ACCGAGCCCT CAAGCGATTC AAGGGAGAAC TGCCAGACAA CGATGTCGGC CTTTTCTTCT TTGCCGGGCA TGGCATGCAG ATCGAAGGCG AGAACTATCT GGCGGCGGTG GACACCGATA CCGCCGGGGA AGTTGAGGCC AAATACTCTT CGCTGCCCTT GAACCGGGTC ATCGAAACCA TGGAAAAGGC GGCAACGTCG ACCAGCATCA CCATCCTGGA TGCCTGTCGC GACAATCCGT TCGAACGGGC CTGGCATCGT TCGGCGGCAA CCCGCGGCCT GGCCCCCGTG TATGCCCCCA AAGGGACCTT GATCGCCTAT GCCACTTCGC CAGGCCAAAC CGCCAGCGAT GGGCACGGAC GCAATGGGGC GTATACCGCT GCATTACTTC AACATATTGC CACTCCCGAC TGTTCGATCG AGAACATGTT CAAGCGGGTC CGCAACACGC TCAGTGCCGC CACACATGGA AAACAGATTT CTTGGGAGCA TACCTCGCTA TCCGGCGAGT TCTACTTCAA CCTGAGCCTT GGGGCTCGCA TTGACGACTA CTCCGACAGC GCGCTCAGCG ACGGCCTGTT CGTGCCCGAC GAAGCCAAAG CATCTCATCG GATTATCAAG GCTCTGAAAA GCCTGACTTG GCCAGTGCAG AATCCGGCTA TTGACGGGTT CTTGTCCGAT ATCGCCAACA AGGCGTCGCT GGACTCTCTC TTCGTTCTCG GGCGGAACAT CTATCAGGCG GCATGCGGCG GATCGAACAG TGCCATTGCC TACCTGAGCG ACTTCGCCGC CCGGACCCAG GCGGCGAAAC CCGAGAAACG AAAAGCGCTA CTGGACGGCA TGCTGTTCGA GGTCTTCTTC GACCCCAAGG CAAAACTCCG AAAAGACTTC AAGACCCGCA GGTTCGAGGA TCTATTCGCC CTCCAGCAGC ATAAAAACCT CTCGTCCAGC TTTGACTTTA TCACCGAATG TCTGCTTCCC GAGGCCGGCC GTTTCTACTC GACCCCTGGC AGAAAACACC CTGTGGTGGT CGATGTCGCG ACGACTCCCG ATAGTGCTGC CAATACGTAT CGACTTAAGT CAATCCATTG CGGCGGTACT AGCATCATGT GGTTGGAGGA TGAGGACTAC GCAGTCGAAC CGGGGGAAAT CCCGAATGCC GAAAAGATGA CCATCGCCAA GTTTGAGGCG CGACTGGCCG AACAAATGGC GGTTCCTTCC CATTTACTGA CCATCAATTA CCTTTCGTTC GACAAACAGG CTCATGAACG CATCCTGTTC CCCTATGGCT GGACGGTTCG GAAACGATAA
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Protein sequence | MSRRLTALVI GNGAYEDASE LENPVNDAED VAAKLEACGF SVIKEIDCTA AAMDRALKRF KGELPDNDVG LFFFAGHGMQ IEGENYLAAV DTDTAGEVEA KYSSLPLNRV IETMEKAATS TSITILDACR DNPFERAWHR SAATRGLAPV YAPKGTLIAY ATSPGQTASD GHGRNGAYTA ALLQHIATPD CSIENMFKRV RNTLSAATHG KQISWEHTSL SGEFYFNLSL GARIDDYSDS ALSDGLFVPD EAKASHRIIK ALKSLTWPVQ NPAIDGFLSD IANKASLDSL FVLGRNIYQA ACGGSNSAIA YLSDFAARTQ AAKPEKRKAL LDGMLFEVFF DPKAKLRKDF KTRRFEDLFA LQQHKNLSSS FDFITECLLP EAGRFYSTPG RKHPVVVDVA TTPDSAANTY RLKSIHCGGT SIMWLEDEDY AVEPGEIPNA EKMTIAKFEA RLAEQMAVPS HLLTINYLSF DKQAHERILF PYGWTVRKR
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