Gene Daro_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2515 
Symbol 
ID3567934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2711801 
End bp2713021 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content57% 
IMG OID637680982 
Productaspartate kinase 
Protein accessionYP_285718 
Protein GI71908131 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.00310544 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.299295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGA TTGTTCAAAA ATACGGCGGC ACGTCGGTCG GTAACCCCGA GCGCATCAAA 
AACGTCGCCA AACGCGTTGC CAAGTTCCAG GCCCAAGGGC ATCAGGTCGT TGTCGTTGTT
TCCGCGATGA GCGGCGAAAC CAACAAGCTG ATTGCACTGG CCAAGGAAGT CCAGGCCAAT
CCCGATCCGC GCGAACTGGA TGCGATCATG TCAACCGGCG AACAGGTCAC TACTGGCCTG
CTTTCCATGG CATTGATGGA CATTGGCTGC AAGGCCAAGA GTTACACCGG TGGCCAGGTC
AAGGTGCTCA CTGACAGCAC CCATACCAAG GCACGCATCC TGTCGATTGA CGAAGCCAAC
ATGCGGCGCG ATCTCGATGC CGGCTATGTG ATCGTTGTTG CCGGCTTCCA GGGCGTCGAT
GCCAACGGCA ATATCACCAC GCTCGGTCGT GGTGGTTCCG ACACCTCTGG CGTGGCGCTG
GCTGCTGCCC TGAAGGCAGA TGAGTGCCAG ATTTACACCG ACGTCGATGG TGTCTACACG
ACCGATCCGC GTGTCGTGCC TGAAGCCAAG AAGCTCGACA CCATCACCTT CGAAGAGATG
CTGGAAATGG CCAGTCTCGG TTCCAAGGTG CTGCAGATTC GCTCCGTCGA ATTCGCCGGC
AAGTACAAGG TCAAACTACG CGTTCTTTCC AGCTTCCAGG ATGAAGGGGA AGGCACGCTG
ATCACTGTTG AGGAAGACAA AAACATGGAA CAACCGATCA TCTCCGGTAT CGCCTTCAAT
CGCGACGAAG CCAAGCTGAC CATGCTCGGC GTTCCGGATA CCCCGGGCAT CGCCTATCAA
ATTCTCGGTG CCATCGCCGA TGCCAACATC GATGTCGACA TGATCATCCA GAACGTTGGC
CACGACGGCA CGACTGACTT CTCCTTCACC GTCAATCGTG GCGAGTTCGC CAAGGCCAAG
GAAATTCTTG AAGGCGTCAA GGCCAAGCTG GGTGCTCGCG AGATCACCGG TGACAACAAG
ATCTGCAAGG TCTCCGCTGT CGGCGTCGGC ATGCGCTCCC ATCCGGGCGT GGCCAGCCAG
ATGTTCAAGG CACTGGCTGA TGAGGGCATC AACATCCAGA TGATCTCCAC CTCCGAGATC
AAGATTTCCG TCGTTCTCGA CGAAAAATAT CTGGAACTGG CCGTTCGCGT GCTGCATCGG
ACTTTCGGTC TCGATCAGTA A
 
Protein sequence
MALIVQKYGG TSVGNPERIK NVAKRVAKFQ AQGHQVVVVV SAMSGETNKL IALAKEVQAN 
PDPRELDAIM STGEQVTTGL LSMALMDIGC KAKSYTGGQV KVLTDSTHTK ARILSIDEAN
MRRDLDAGYV IVVAGFQGVD ANGNITTLGR GGSDTSGVAL AAALKADECQ IYTDVDGVYT
TDPRVVPEAK KLDTITFEEM LEMASLGSKV LQIRSVEFAG KYKVKLRVLS SFQDEGEGTL
ITVEEDKNME QPIISGIAFN RDEAKLTMLG VPDTPGIAYQ ILGAIADANI DVDMIIQNVG
HDGTTDFSFT VNRGEFAKAK EILEGVKAKL GAREITGDNK ICKVSAVGVG MRSHPGVASQ
MFKALADEGI NIQMISTSEI KISVVLDEKY LELAVRVLHR TFGLDQ