Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2492 |
Symbol | |
ID | 3568041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2690461 |
End bp | 2692557 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637680959 |
Product | cytochrome c, class I |
Protein accession | YP_285696 |
Protein GI | 71908109 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants [COG3258] Cytochrome c |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.00140351 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.928162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGAAGA AAGCGTATTC GGTCGGCGGC GCCAGCCAGA CACCTCCAGT CATCCGCCAG TACCAGAGCA TCCAGCAAAG GATTGGCGGC TTGCTGCTTA TCGTTAGCGC CCTGCTCGGT ATCACGAGCC AGGCTGTCGC CGACGACGCA CAAGTCGAAC GCGGCCGTTA CCTGGCTCGC CTGGGCGACT GCGTGGCCTG CCACACAACG GACAAGGGCG CCGAGATGGC TGGCGGCCGT GCGCTGGAGA CGCCGTTCGG CAAGTTGTAT TCGACCAACA TCACGCCAGA CAGCGATACC GGCATCGGCA AATACAGCTT CGAACAGTTC GACCGCGCAA TGCGCAAGGG CATTGCCGCC GACGGCCACA ACCTTTACCC GGCCATGCCT TACCCGTCCT ACGCCAAGCT GACGGGCGAA GACATGCAGG CGCTTTATGC TTACCTGATG AAGGGTCTGC CCGCCGTCAA GCAGACCAAC AAGCCAGACG AAATGCACTG GCCATTCAGC ATGCGCTGGG GCCTTGCCAT CTGGAACTGG TTCTTCCTGG ATGACACGCC GTTCAAGTCG GATACGGCCA AGGATGAGAC CTGGAACCGC GGCGCCTATC TGGTTCAGGG GCTAGGTCAC TGCGGTGCCT GCCATACGCC GCGCGGCCTG CTCTTTCAGG AGAAGGCGAT GAGCGATGCC GGATCGAATG GCAGCTACTT CCTGGCCGGC GAAACCGTCG AAGCCTGGCG CGCGCTCAGT CTGCGCAACC TGTGGACCGT CGAGGACACA GCCACCTTCC TGAAGACCGG ACAGAATCGC TTTGCCACTG CCTCGGGCAG CATGACCGAA GTCATCACGC ACAGCACCCA GCACTTCAAG GAAGCTGACC TGACCGCAGT CGCCAACTAC CTCAAGTCCC TACCTCCCGG ACCATACGAC AAGCCGATGC CGGCCGGCGC GCCAAAACCG GTGGTTGCCG CCCATGTTCC GGAAAAGCTG TTCACCACAC GCGGCGGCCT GGGCTACATC CAGTTCTGTG GTGACTGTCA CCGGGCCGAT GGCGGCGGTG TGGCCAAGAT ATTTCCACCC CTGGCCGGCA ACCCGGCCGT GATGTCGAAG GATGCCTCTA CCCTGTCCCA CATCATACTG ACCGGCGGCC AAACCGCGGC AACCGCAACC CACCCTCGCG TTTTCGTCAT GCCGGCCTTT GCCCGCCTAA GCGACCAAGA ACTGGCCGAG ATTCTTAGCT TCGTCCGCAA CAGCTGGGGT GATGGCGCAC CCAGCGTGGA TGTCGCGACG GTAGCCAATA TGCGCGCCAA ACTCGATCCC AAGACGACCG ATTCGAGCAA GTTCGACACG CCGCGCCTTG CGGACATGCT GAAGGCTGCC AATGCAGAGC AACTGGTCCG CGGCATGCGC CTCAACCTGG AAACGAAGGA TATCTTGCCC GGACATGTCG GCGATCAGCT GAACTGCACC AGTTGCCACC TCAATGCCGG TACCGTGGCC GATGGCTCGC CTTATGTCGG CGTCTCGGCC TTCTTCCCGA GCTACGCACC ACGTGCCGGC CGGACGATCA CGCTGGAAGA CCGTATCAAC GGCTGCTTCA AGCGCTCGAT GAACGGCAAG CCCCTGCCCA AGGAGTCGCC CGACATGAAG GCCATGGTCG CCTACTTCGA GTGGATGAAG CGTGAAACCA AGCCGGAGGA CAAGGTGCCC GGACGCGGCG TCGGCAAGAT CGACCGCTCG CTCAAGCCGG ACGGTGACAA CGGCAAGAAG GTCTATGCGG AGCAATGTGC GATCTGTCAC GGCGAAAACG GCGAAGGCCT GAAGAACACG GTTGGCACGA TGGTTTACCC GCCACTCTGG GGCGACGAGT CCTTCAATAT CGGCGCCGGC ATGGCCCGCA CCTACACGGC TGCCGCCTTC GTCAAGCGCA ACATGCCGAT CGGCTTCCAC GACAAGTTCC CGCTCGGTCA GGGCGGGCTC TCCGACCAGG AAGCACTCGA TGTGGCCGAA TACTTCAGCC ACCAGCCGCG TCCGGACTTC CCGGAAAAGG TCAATGACTG GCCCAAGGAT CCAAAGCCGG CCGACGCCCG CTACTGA
|
Protein sequence | MSKKAYSVGG ASQTPPVIRQ YQSIQQRIGG LLLIVSALLG ITSQAVADDA QVERGRYLAR LGDCVACHTT DKGAEMAGGR ALETPFGKLY STNITPDSDT GIGKYSFEQF DRAMRKGIAA DGHNLYPAMP YPSYAKLTGE DMQALYAYLM KGLPAVKQTN KPDEMHWPFS MRWGLAIWNW FFLDDTPFKS DTAKDETWNR GAYLVQGLGH CGACHTPRGL LFQEKAMSDA GSNGSYFLAG ETVEAWRALS LRNLWTVEDT ATFLKTGQNR FATASGSMTE VITHSTQHFK EADLTAVANY LKSLPPGPYD KPMPAGAPKP VVAAHVPEKL FTTRGGLGYI QFCGDCHRAD GGGVAKIFPP LAGNPAVMSK DASTLSHIIL TGGQTAATAT HPRVFVMPAF ARLSDQELAE ILSFVRNSWG DGAPSVDVAT VANMRAKLDP KTTDSSKFDT PRLADMLKAA NAEQLVRGMR LNLETKDILP GHVGDQLNCT SCHLNAGTVA DGSPYVGVSA FFPSYAPRAG RTITLEDRIN GCFKRSMNGK PLPKESPDMK AMVAYFEWMK RETKPEDKVP GRGVGKIDRS LKPDGDNGKK VYAEQCAICH GENGEGLKNT VGTMVYPPLW GDESFNIGAG MARTYTAAAF VKRNMPIGFH DKFPLGQGGL SDQEALDVAE YFSHQPRPDF PEKVNDWPKD PKPADARY
|
| |