Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2480 |
Symbol | |
ID | 3568101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2678864 |
End bp | 2681998 |
Gene Length | 3135 bp |
Protein Length | 1044 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637680948 |
Product | heavy metal efflux pump CzcA |
Protein accession | YP_285685 |
Protein GI | 71908098 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.578305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAACG CCCTGATCGA CTGGTCGGCC CGCAACCGAT TCCTGGTGCT ACTTACCACG CTGTTCATCA TCATCGCCGG CACCTGGTCG GTGCTGAAGA CGCCGCTCGA CGCCATCCCC GACTTGTCCG ACGCCCAGGT CATCCTGTAC ACCGAATTTC CCGGGCAGGC GCCGCAGGTG GTCGAGGACC AGGTTACCTA CCCGCTGACC ACCGCCCTGC TCTCGGTACC GAAATCCAAG GTCGTGCGCG GCTTTTCGTT CTTCGGCGCC TCTTTCGTCT ACGTCATTTT CGAGGATGGC ACCGACATCT ACTGGGCGCG TTCGCGAGTG CTGGAGTATG TGAATTCGGT GTCCGGCAAG CTGCCGAAGG GCGTCAATCC GACCCTCGGC CCGGATGCCA CCGGGGTCGG CTGGGTCTAC CAGTACGCCG TGCTGGCCAA GGATAAAACG CTGGCCGAAC TGCGCACGCT GCAGGACTGG TACCTGCGCT ACCAGCTGGC CAAGGCGCCC GGCGTCGCCG AGGTGGCGAG TATCGGCGGC TTTGTGCAGC AGTATCAGGT CACCGTCGAT CCTGTGAAGC TGCGCGCATT CGGTATTCCG CTGATGCGCG TCGCCGAGGT GATCCGCAAT TCCAACCGCG ACGTCGGCGG CCGCACGCTG GAAATGGCCG AAACCGAGTA CATGGTGCGT GGCCGCGGCT ATCTGCGCGG CAAGAGCGAC ATTGAGCAAC TGGTCCTCAA GGCACAGAAT GGCACGCCAG TCCGCATCGC CGACATCGGC CGGGTCGAGC TGGTGGCTGA CGAACGGCGC GGCATTACCG AACTGAACGG TGAAGGCGAA GTGGTTTCCG GCATCGCCAT GTCGCGCTAC GGCCAGAACG CGCTGGAGGT CATCCACAAC CTGAAGGCCA AGGTCGCTGA AATCTCCGCC GGGCTACCGG AAGGCGTCAG CATCGCCACC GTCTATGACC GCTCCGAACT GATCGAGCGC GCCATCGCCA CGCTGAAGCG CACGCTGGCC GAGGAAAGCC TGATCGTCGC GCTGGTCTGC GTCGTCTTCC TGTTGCACCT GCGCTCGGCG CTGGTCGCCA TCATCATGCT GCCGGTCGGC ATCCTGGCCG CCTTCATCGG CATGCGGGCG ATTGGCGTCA ACGCCAACAT CATGAGCCTG GGCGGCATCG CCATTGCCGT CGGCGCGATG ATCGACGCCG CCATCGTGAT GATCGAAAAC GCCCATAAGC ACCTGGAGCG GCTGCAACCG GGCGAATCAC GGAGCGATGC GATGATCGCC GCCTGCAAGG AGGTTGGCCC CGCCCTCTTC TTCAGCCTGC TGATCATCAC CGTCTCCTTC CTGCCCGTCT TCACGCTCGA AGCGCAGGAA GGCCGGCTGT TCGCGCCGCT GGCATGGACC AAGACCTTCG CCATGGCCGC CGCCGCCTTC CTGTCGGTGA CGCTGGTGCC GGTGCTGATG CTGCTGTTCA TTCGCGGCGA CATCAAGCCG GAAGCGCAGA ATCCGGTCAA CCGCGTGCTG ATCCGCCTGT ACCGCCCGAT CATCGCCTGG GTCATGCAGT GGAAGAAGGC AACCATCGCC GCCGCCCTCG TTGCCATGGC AATCACCCTC GTCCCGGCCA GCCGTCTGGG TTCGGAATTC ATGCCGACGC TCAACGAAGG CACGCTGTTC TACATGCCGA CCACCCTGCC CGGTCTGTCG GTGACCAAGG CGGCTGAACT GCTGCAGACC CAGAACAAGA TCATCAAGAG CTTCCCGGAA GTCGCCTCGG TGTTCGGCAA GGCTGGCCGA GCGCAGACGG CCACCGATCC GGCGCCGATG GAAATGTTCG AGACGGTGAT CAATCTGAAG CCGGAAAGCG AATGGCGCCC CGGCATGACC ACTGACAAGC TGATCGCCGA ACTCGACAAG GCGCTCCAAT TCCCCGGGGT CGCCAATTCC TGGACGATGC CGATCAAGGC ACGCATCGAC ATGCTGTCCA CCGGCATCCG CACCCCGATC GGCATCAAGG TCTTCGGCAA GGATTTGATC GAAATGGAAC GCCTGGCCAA GGAAATCGAG AGCGTCGTCA AGGCCGTGCC AGGGACCAGC AGCGCCTTCG CCGAACGGAT CACCGGTGGC TTCTACCTCG ATATCGTGCC CGACCGCAAC GCGCTGGCCC GCTACGGGCT GTCGGTCGGC GAAGTCATGG ACGTCGTGGC AGCGGCGCTG GGCGGCGAAA TGGTCACCAC CACGGTTGAA GGCCGTGAGC GCTTCGGCGT CACCGTCCGC TACCCGCGCG ACCTGCGCAG CGACCCGCAG GCCATCGCCC GTGAAGTGCT GGTGCCGGTA CCGGCCGAGA TGGGTGGGGC GGCCAGCATG ATTCCGCTCG GCCAGCTGGC CGAAGTGAAG ATCAGCACCG GCGCCCCGGC CATCCGCACC GAAAACGCCC TGCTCTCGGC TTACATCTAT GTCGACATCC GCGATCGCGA CATCGGCTCC TACGTTGCCG AGGCGCGCCA GGCGGTCAAT GAGAAGGTCA AATTCTCCCC CGGCACCTAC GCCACCTGGA GCGGCCAGTT CGAGTACATG GAACGCGCCA CTGAAAAGCT CAAGGTCGTC GTGCCAATCA CGCTGCTGAT CATCTTCCTG CTGCTCTACC TGAATTTCCG ACGCATCACC GAGACGCTGA TCGTCATGCT CTCGGTTCCC TTCGCGTTGG TCGGCGGCAT CTGGCTAATG TGGTGGCTCG GCTACAACCT GTCGGTCGCC GCGGCCATTG GCTTCATCGC GCTGGCCGGC GTGGCTGCCG AAACCGGGGT CATCATGTTG ATCTACCTCG ACCATGCCTG GCAGACCGTG CAGGCGAAAT GTGCCGCCGA AGGCCATCGT CCGCAGGCCT CGGATCTCTA CGCTGCCGTG ATGGAAGGTG CCGTCGAACG GGTGCGCCCG AAGATGATGA CGGTCAGCGC GATCATGGCC GGCCTGCTGC CCATCCTGTG GGGCACCGGC ACCGGCTCGG AAGTCATGAG CCGGATCGCG GCACCGATGG TCGGTGGCAT GATTTCCTCA ACGGTGCTGA CGCTGGCCGT CATCCCATCC ATCTACGCCC TGCTGATGCA ACGACGGCTA CGCAATGCCG CTTGA
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Protein sequence | MLNALIDWSA RNRFLVLLTT LFIIIAGTWS VLKTPLDAIP DLSDAQVILY TEFPGQAPQV VEDQVTYPLT TALLSVPKSK VVRGFSFFGA SFVYVIFEDG TDIYWARSRV LEYVNSVSGK LPKGVNPTLG PDATGVGWVY QYAVLAKDKT LAELRTLQDW YLRYQLAKAP GVAEVASIGG FVQQYQVTVD PVKLRAFGIP LMRVAEVIRN SNRDVGGRTL EMAETEYMVR GRGYLRGKSD IEQLVLKAQN GTPVRIADIG RVELVADERR GITELNGEGE VVSGIAMSRY GQNALEVIHN LKAKVAEISA GLPEGVSIAT VYDRSELIER AIATLKRTLA EESLIVALVC VVFLLHLRSA LVAIIMLPVG ILAAFIGMRA IGVNANIMSL GGIAIAVGAM IDAAIVMIEN AHKHLERLQP GESRSDAMIA ACKEVGPALF FSLLIITVSF LPVFTLEAQE GRLFAPLAWT KTFAMAAAAF LSVTLVPVLM LLFIRGDIKP EAQNPVNRVL IRLYRPIIAW VMQWKKATIA AALVAMAITL VPASRLGSEF MPTLNEGTLF YMPTTLPGLS VTKAAELLQT QNKIIKSFPE VASVFGKAGR AQTATDPAPM EMFETVINLK PESEWRPGMT TDKLIAELDK ALQFPGVANS WTMPIKARID MLSTGIRTPI GIKVFGKDLI EMERLAKEIE SVVKAVPGTS SAFAERITGG FYLDIVPDRN ALARYGLSVG EVMDVVAAAL GGEMVTTTVE GRERFGVTVR YPRDLRSDPQ AIAREVLVPV PAEMGGAASM IPLGQLAEVK ISTGAPAIRT ENALLSAYIY VDIRDRDIGS YVAEARQAVN EKVKFSPGTY ATWSGQFEYM ERATEKLKVV VPITLLIIFL LLYLNFRRIT ETLIVMLSVP FALVGGIWLM WWLGYNLSVA AAIGFIALAG VAAETGVIML IYLDHAWQTV QAKCAAEGHR PQASDLYAAV MEGAVERVRP KMMTVSAIMA GLLPILWGTG TGSEVMSRIA APMVGGMISS TVLTLAVIPS IYALLMQRRL RNAA
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