Gene Daro_2474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2474 
Symbol 
ID3568095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2673168 
End bp2673839 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID637680942 
Productheavy metal response regulator 
Protein accessionYP_285679 
Protein GI71908092 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC TCATTGTTGA AGACGAAGCG AAGACTGGCG ATTACCTCAA ACAGGGGCTT 
TCCGAAGCTG GCTTTGGCGC CGATCTCGCC CGCAATGGGC TGGATGGGAT GCATGAAGGT
CTGGCCGGTG AATACGACCT GCTGATTCTC GACGTTAACC TTCCGGGGCT GGATGGCTGG
CAGGTACTGA AAGCCTTGCG TGCTGCCGGG CGCGATCTGC CAGTGCTGTT CCTGACGGCG
CGCGACCAGG TTGAGGATAG GGTCAAGGGG CTGGAACTCG GTGCCGATGA TTACCTGGTC
AAACCCTTCG CTTTCTCGGA GCTGCTCGCT CGCGTCCGAA CACTGCTGCG TCGCGGTCGT
GCCAAGGAGA CGGGGAATCT GAGCATTGCT GATCTTGAAC TCGATGTGCT GAAGCGGCGG
GCGATCCGGG CCGGTCAGCG CATCGACCTG ACGGCCAAGG AATTCGCGCT GCTTGAACTG
TTCCTGCGCC GGCAGGGCGA GGTGCTGGCA CGCAGTTTCA TCGCCTCGCA GGTCTGGGAC
ATGAATTTCG ATTCCGACAC CAATGTGGTC GAAGTTGCCA TCCGCCGCCT GCGGGCCAAG
GTCGATGAGG AGTTCACGCC CAAACTGATC CATACCCTGC GCGGCATGGG CTATGTGATG
GAGATTCGCT GA
 
Protein sequence
MKILIVEDEA KTGDYLKQGL SEAGFGADLA RNGLDGMHEG LAGEYDLLIL DVNLPGLDGW 
QVLKALRAAG RDLPVLFLTA RDQVEDRVKG LELGADDYLV KPFAFSELLA RVRTLLRRGR
AKETGNLSIA DLELDVLKRR AIRAGQRIDL TAKEFALLEL FLRRQGEVLA RSFIASQVWD
MNFDSDTNVV EVAIRRLRAK VDEEFTPKLI HTLRGMGYVM EIR