| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2448 |
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| Symbol | |
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| ID | 3568221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2647811 |
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| End bp | 2649958 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637680916 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_285653 |
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| Protein GI | 71908066 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.257146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.977179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACG TCGTTAAAAA GACCTTCGCC TATGGGGACC ATCAGGTCAC CATCGAAACC
GGTGAAGTTG CCCGCCAGGC TGGCGGTGCT GTTCTCGTTT CCATGGAAGA AACCGTGGTT
CTGGTTACCG TCGTGGCTGC CAAGAATGCC AAGCCGGGTC AGGATTTCTT CCCGCTGACC
GTTGATTACC AGGAAAAGAC CTACGCTGCC GGCCGTATCC CCGGTGGCTT CTTCAAGCGC
GAAGGCCGTC CTTCCGAAAA GGAAACGCTG ACCTGCCGCC TGATCGACCG TCCGATCCGT
CCGCTGTTCC CGGATGGTTT CTACAACGAA GTCCAGGTCA TCGCCACGGT GATGTCCCTG
AACCCGGAAA TCGATTCTGA CATTCCCGCC TTGATTGGCG CTTCCGCCGC ACTGGCTATT
TCCGGCGTGC CGTTCAACGG CCCGATCGGC GCCGCTCGCG TTGGTTATAT CGATGGTCAG
TACGTCCTGT GCCCGACCCT GAGCCAACTC AAGGGTAGCC AGCTCGACCT CGTCGTCGCC
GGTACCGAAG CTGCTGTGCT GATGGTTGAG TCCGAAGCCG ACCAGCTGTC CGAAGAGGTC
ATGCTCGGCG CCGTCGTTTT TGGCCACACC GAAATGCAGA AGGCGATCAA CGCCATCAAC
GAACTGGTTG AAGAAGCCGG CAAGCCGGAA TGGGAATGGG AGGCTGCGCC GAAAGACGAA
GCGTTGGTTG CCAGCCTGTC CGCTCTGGTT AGCGCCAAGC TCGAAGAAGC CTACAACATC
ACCGTCAAGC AAACGCGCAG CCAGGCCGTC AAGGCCATCC GTGCTGAAGC TGTTGCCGCC
CTTTGTACCG GTGCCGAAGG CGCCCCGGAC GAAAACACCG TCGGCAACCT GTTCCATGAA
ATCGAAGCCT CGATCGTTCG TGGCCGCATC CTGAGCGGTG CCCCGCGTAT CGACGGTCGC
GACACGCGCA CTGTGCGTCC GATCACCATG CGTTCTGGCG TTCTGCCGCG TACCCATGGT
TCCGCCCTGT TTACCCGTGG CGAAACCCAG GCGCTGGCAG TTGCCACGCT CGGTACCAAC
CGCGACGAGC AGATCATCGA TGCCCTGGCT GGTGAGTATC GTGATCGCTT CATGCTGCAC
TACAACATGC CCCCGTACGC CACCGGCGAA TGCGGTCGTG TCGGTACGCC GAAGCGTCGT
GAAATCGGTC ACGGCCGTCT GGCCAAGCGT GCACTGCTTG CTGTGCTACC AAAGCCGGAA
GACTTCTCCT ACTCGATGCG TCTGGTTTCG GAAATCACTG AATCCAACGG TTCGTCCTCG
ATGGCTTCCG TCTGTGGCGG CTGCCTCGCC CTGCTCGACG CCGGTGTGCC GCTCAAGGCC
CACGTCGCCG GTATCGCCAT GGGGCTGATC AAGGATGGCA ATCGTTTTGC CGTTCTGACC
GACATTCTCG GCGACGAAGA TCACCTCGGT GACATGGACT TCAAGGTGGC CGGTTCGACA
ACCGGTATTA CTGCGCTGCA GATGGACATC AAGATCCAGG GTATCACCAA GGAAATCATG
CAGGTTGCAC TGGCCCAGGC CAAGGAGGCA CGCATCCACA TCCTGAACCT GATGCAGGAA
TCGGCTGCCG GTCCGCGTGA AGAGATGTCT GCTTACGCTC CGCGTCTGTA TACCTTCAAG
ATCAATCCGG AAAAGATCCG TGACGTCATT GGCAAGGGCG GTGCTGTTAT CCGCGCCCTG
ACCGAAGAGA CCGGCACGAC GATCGATATT CAGGATGATG GCACGATTAC CATTGCTGCC
ACCAGTGGCG AAGCTGCTGC TGCGGCTCGT TCGCGTATTG ATGCGATTAC CGCTGAAGTC
GAGATTGGCA AGATCTATGA AGGAACTGTG CTGAAGATTC TTGACTTCGG TGCAATCGTC
TCCGTGTTGC CGGGCAAGGA TGGTTTGCTG CACATCTCCC AGATCGCTCA AGAGCGAGTC
AATAAGGTCG AAGATTACGT CAAGGAAGGC CAGATTGTTC GCGTCAAGGT TCTGGAAACC
GATGACCGTG GTCGCGTCAA GCTGTCGATG AAGGCTGCTG CAGCGGACGA GGGTACGGTA
GCTCAGCCGG TCGCTGCACC AGAGGCCGCT GTCCAACAAC AGCAGTAA
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| Protein sequence | MFNVVKKTFA YGDHQVTIET GEVARQAGGA VLVSMEETVV LVTVVAAKNA KPGQDFFPLT
VDYQEKTYAA GRIPGGFFKR EGRPSEKETL TCRLIDRPIR PLFPDGFYNE VQVIATVMSL
NPEIDSDIPA LIGASAALAI SGVPFNGPIG AARVGYIDGQ YVLCPTLSQL KGSQLDLVVA
GTEAAVLMVE SEADQLSEEV MLGAVVFGHT EMQKAINAIN ELVEEAGKPE WEWEAAPKDE
ALVASLSALV SAKLEEAYNI TVKQTRSQAV KAIRAEAVAA LCTGAEGAPD ENTVGNLFHE
IEASIVRGRI LSGAPRIDGR DTRTVRPITM RSGVLPRTHG SALFTRGETQ ALAVATLGTN
RDEQIIDALA GEYRDRFMLH YNMPPYATGE CGRVGTPKRR EIGHGRLAKR ALLAVLPKPE
DFSYSMRLVS EITESNGSSS MASVCGGCLA LLDAGVPLKA HVAGIAMGLI KDGNRFAVLT
DILGDEDHLG DMDFKVAGST TGITALQMDI KIQGITKEIM QVALAQAKEA RIHILNLMQE
SAAGPREEMS AYAPRLYTFK INPEKIRDVI GKGGAVIRAL TEETGTTIDI QDDGTITIAA
TSGEAAAAAR SRIDAITAEV EIGKIYEGTV LKILDFGAIV SVLPGKDGLL HISQIAQERV
NKVEDYVKEG QIVRVKVLET DDRGRVKLSM KAAAADEGTV AQPVAAPEAA VQQQQ
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