| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2436 |
|---|
| Symbol | |
|---|
| ID | 3568379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2633141 |
|---|
| End bp | 2634523 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637680902 |
|---|
| Product | sugar transferase |
|---|
| Protein accession | YP_285641 |
|---|
| Protein GI | 71908054 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03013] sugar transferase, PEP-CTERM system associated
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 0.404027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGAT TATTCAATCA CTGGTTTTCT TGGCGGAGTG CTGCAGGGAT GCTGTTCGAC
CTGTCGTTTC TAATTGTCAG CCTCGCCATC ACGCTGATGT GGGTACACAG TGACCTACCA
ATCAATCCTC TACACATCAT CATCTATGCC GCACTGTTTG CCATAGTGAT GCTTTGTATC
AATACCGTGC TGGGGCTATA TCAGCGCTTG TCCATTCGTG CCTCGACCGA AACCCGTGCT
CGAGTCGTTT TATCCCTTTA TCTCGCGATA CCTGTAGCGT ACCTGCTCTA CGCATTGTTG
CCATTGGCAG CAGTCAATCG TGAATTGATT CATCTTTCGG CCATGTCGGC CGTATTTGGC
ATGCTCGTTA CCCGGGTGGG GGCAGCTCAT GCCCCCGCTG CAAAGATGTT GCGGCGCCGT
ATTCTGGTTT TCGGGACTGG CTACCAAGCA TTGGCCGTCA AACTTGCCTT GGAGCGTTCA
GACCCGTCTG CACAGATTAT TGGATTCTTC CCTGGTGCCA ATGAAGATCA ATCTCAAGTT
CCAGCAAATC TAATACTCAG CCGTGACCAG TCGTTAACCG ACACCGCTCG CAATATAAAT
GCGGATGAAA TCGTTGTCGC ACTAAGTGAA CGGAGAGGTG GAGCAATGCC GCTACGTGAA
CTGCTTGACT GCAAACTGCA GGGTATTCGC GTTCTCGATT TGGCAAGCCA CTTCGAACAA
ACGCTTGGTC AGATTCGGCT TGATTCACTG TACGCAGGAT GGCTCATCTT TGGTGATGGT
TTCCGCCAGG GCGCGTTGAG GACAGCCGTA AAGCGTGTAT TTGATATTGT CTGCGCCGCT
ACTCTGATCA TTGCCGCCCT GCCCATCATG CTCCTGGCGG CATTGTTGAT CGTCGTGGAA
GATGGTTTTC CTCTGCTCTA TCAGCAAGAG CGGGTTGGCC TAAATGGTCG CCTGTTCAAC
GTCATCAAGT TTCGCAGCAT GCGACGCGAT GCCGAAAAAG ATGGAAAACC GATCTGGGCG
CAGGCGCAAG ACAACCGCGT CACCCGTATC GGCCAAATTA TCCGCAAACT TCGTATCGAT
GAACTACCTC AATTGTTTAG CGTTCTGAAA GGCGACATGA GCCTAGTCGG ACCACGCCCT
GAACGTCCGT TCTTTGTGGA TCAACTGACC AAGGAAATTC CATTCTATGC GGTACGTCAC
AGCGTGAAGC CTGGCGTAAC CGGCTGGGCA CAAGTACGGT ATCACTATGG CGCCACGGTC
GAAGATTCAG CTGAAAAATT GCAGTACGAT CTCTACTATG TAAAAAATCA CTCTCTTTTT
CTGGATATTG TGGTTCTTTT TGAAACAGTG GGAGTCGTAC TGACAGGCAA AGGTGCTCAC
TAG
|
|---|
| Protein sequence | MIRLFNHWFS WRSAAGMLFD LSFLIVSLAI TLMWVHSDLP INPLHIIIYA ALFAIVMLCI
NTVLGLYQRL SIRASTETRA RVVLSLYLAI PVAYLLYALL PLAAVNRELI HLSAMSAVFG
MLVTRVGAAH APAAKMLRRR ILVFGTGYQA LAVKLALERS DPSAQIIGFF PGANEDQSQV
PANLILSRDQ SLTDTARNIN ADEIVVALSE RRGGAMPLRE LLDCKLQGIR VLDLASHFEQ
TLGQIRLDSL YAGWLIFGDG FRQGALRTAV KRVFDIVCAA TLIIAALPIM LLAALLIVVE
DGFPLLYQQE RVGLNGRLFN VIKFRSMRRD AEKDGKPIWA QAQDNRVTRI GQIIRKLRID
ELPQLFSVLK GDMSLVGPRP ERPFFVDQLT KEIPFYAVRH SVKPGVTGWA QVRYHYGATV
EDSAEKLQYD LYYVKNHSLF LDIVVLFETV GVVLTGKGAH
|
|---|
| |