Gene Daro_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2401 
Symbol 
ID3567585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2589019 
End bp2590095 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content51% 
IMG OID637680868 
ProductATPas 
Protein accessionYP_285607 
Protein GI71908020 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID[TIGR03015] putative secretion ATPase, PEP-CTERM locus subfamily 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value0.471861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAAG CGTTCTATGG CTTGACCAGC AAGCCTTTCC AACTAAATCC AGACCCCTCC 
TTCTACTTCG GTAGCAAGCA GCACCGGCGC GCCGCGGCCT ATCTCGAATA TGGCCTACAC
CAAAATGAAG GATTTATTGT CATCACTGGA GAAGTCGGTG CCGGCAAGAC AACCATTGTC
CGAGGCATGC TTGACAGTCT GGACCAGGAC AAGGTGATTG CCGCCCATCT AGTCAGCACC
CAGCTTGATG CCGACGATAC CCTTCGCCTG GTTGGCGCGG CCTTTGGCTT GCGTACCAAA
GATGTATCGA AGGCTGATGT CCTGATGACC TTGGAGGCCT TCCTGATCAG CATGACCGGC
AAGGGCAAGC GCTGCCTTCT GGTTGTCGAT GAGGCCCAGA ATCTGACGCA ACGTGCGGTC
GAAGAACTGC GCATGCTTTC AAACTTTCAA TTTGGCAATC ACGCACTTCT GCAAAGCTTC
CTCGTTGGTC AGCCAGAATT CCGCCATATC CTGCAGAGCC CGAATTTGAT GCAGTTTCGG
CAACGAGTAA TTGCTGCCTG CCATATTGGA CCACTTGATG TCGATGAAAC CAAGTCTTAT
ATCGATCATC GTCTCAAATG CGCTGGAGCC AATGACAGCA TCGTTATTTC CCCTGACGCA
CACGAAGCTA TCTTCAAAGC CAGTAGCGGT ATTCCCAGGA GAATTAACTC TGTCTGCGAC
CGACTATTGC TCTTCGGTTT CCTGAGCAAC AAGAAAGAAT TCAAGGCAGA AGATGTTGAA
GAAGTTGCCA GAGAAATCTA CGAAGAAACA ATGGGTGGCT CCACATTGAT ATCAGCGCCC
AACGGATTAT CTGATGTTGA TAACAGCCAA TTCTCCCTTG CCGACGGTTC CATTTGTCAT
CCTGCAGATT TCCTGGCCTC ATTGAACGTT CAGCAATTCG GCGACCGCCT TGCGCGCCTT
GAACACGGAT TGACTCAGCT CCAGAAAACC AATAGTGCTA CGCTTGCCCT GCTTCAGCAG
GTACTTGGCA ATCGTACTCA AACCCCAATT CCTGAAATCG AGAAAACAAA TGCCTAG
 
Protein sequence
MYEAFYGLTS KPFQLNPDPS FYFGSKQHRR AAAYLEYGLH QNEGFIVITG EVGAGKTTIV 
RGMLDSLDQD KVIAAHLVST QLDADDTLRL VGAAFGLRTK DVSKADVLMT LEAFLISMTG
KGKRCLLVVD EAQNLTQRAV EELRMLSNFQ FGNHALLQSF LVGQPEFRHI LQSPNLMQFR
QRVIAACHIG PLDVDETKSY IDHRLKCAGA NDSIVISPDA HEAIFKASSG IPRRINSVCD
RLLLFGFLSN KKEFKAEDVE EVAREIYEET MGGSTLISAP NGLSDVDNSQ FSLADGSICH
PADFLASLNV QQFGDRLARL EHGLTQLQKT NSATLALLQQ VLGNRTQTPI PEIEKTNA