Gene Daro_2395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2395 
Symbol 
ID3567579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2581907 
End bp2583121 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content48% 
IMG OID637680862 
Producthypothetical protein 
Protein accessionYP_285601 
Protein GI71908014 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.111806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.574816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC TTGCATTCCG CAACATTTTT CGCCAGTACA TTCGTACAGC AATCACGCTA 
GCCGCAATTG TATTTGGCGT TGTCGGACTG ATCCTGGGAG GCGGCTTTGT CCGGGACATT
TTTTTTCAAC TCGGCGAAGC CTTGATCCAT TCCCAATCTG GCCACTTGCA AGTAGTCAAG
ACCGGTTACT TCACTTATGG CTCAAGGTCT CCGGAAAAAT TTCTGATCAC CGACTCCTCG
TCCCTGAAGC GTGAATTGGC AAAGATTCCT GAAATACAGG AAGTACTCGA ACGAGTCAGT
TTCACAGGGC TACTCAACAA CGGAAAAACG GATTGGCCAA TCGTCGCTGA TGGTGTCGAA
CCCGATGGTG AAGCACGACT TGGCAGCTTC ATGCAGATCG TCGAAGGGCG ACAGCTTACC
CACAAAGACA ATTTCGGAGT AACGGTTGGG CAAGGAATTG CCAAGGCACT TAATCTCAAA
CCGGGCGACA GGGTGTCTCT GCTAGTCAAT ACACCAGAAG GCGCCCTGAA TACGATGGAA
CTCAACATCG TAGGTATTTT TCAGAGCTTC TCGAAAGACT ACGACGCCCG TTTCATTCGC
TTACCCTTAC CAGCAGCTCA AGAGCTACTT GGATCGAATG GCATAAATAG TCTGGTCATC
TCCCTAAAGC AGACGTCCGA CACAGAAACA GTGTCACTTA AACTGAAGGC CATACTCAAC
CCTGATCAAT ATGAAAGCCG AACCTGGATT CAGCTTAATG ACTTCTACGA AAAGACTGTT
GCCCTTTATG AACAGCAATT CGGCTTTCTG CAATTGATCA TCCTGACCAT GGTTCTTTTG
AGTGTAGCCA ACAGTGTCAG CATGAGCATT TTTGAGCGCA CAGGTGAGTT CGGAACAATT
ATGGCCATAG GAAGTCGCCC AATAGATGTC ATTAAAATGT TGATAACTGA AAGCGCACTG
CTAGGTTTGA TCGGGTCAGG ATTAGGCGTT GTACTCGGCA TCGCTGCCGC TCTGTTGATA
TCCAGTATAG GGATTCCTAT GCCACCGCCT CCAAACGCAA ACCTCGGTTA CATGGCTACG
ATACAACTCG CTCCGATCGA CATTCTTATT TCGTTCGCAA TTGGCTTTTT GGCAACAACG
CTCGCCTGTC TCTGGCCTGG AATCCGTGTA ACCAAGCTGC CAGTCATCGA TGCATTGCGA
CAGAATCAGA TCTAA
 
Protein sequence
MIKLAFRNIF RQYIRTAITL AAIVFGVVGL ILGGGFVRDI FFQLGEALIH SQSGHLQVVK 
TGYFTYGSRS PEKFLITDSS SLKRELAKIP EIQEVLERVS FTGLLNNGKT DWPIVADGVE
PDGEARLGSF MQIVEGRQLT HKDNFGVTVG QGIAKALNLK PGDRVSLLVN TPEGALNTME
LNIVGIFQSF SKDYDARFIR LPLPAAQELL GSNGINSLVI SLKQTSDTET VSLKLKAILN
PDQYESRTWI QLNDFYEKTV ALYEQQFGFL QLIILTMVLL SVANSVSMSI FERTGEFGTI
MAIGSRPIDV IKMLITESAL LGLIGSGLGV VLGIAAALLI SSIGIPMPPP PNANLGYMAT
IQLAPIDILI SFAIGFLATT LACLWPGIRV TKLPVIDALR QNQI