| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2169 |
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| Symbol | |
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| ID | 3569811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2339770 |
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| End bp | 2342571 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637680638 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_285378 |
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| Protein GI | 71907791 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGA ACAGCTTCCT AGATCTGATT TCCGGCGGCG CCGCCTGGCG CCAGACCGAC
CGGCTACTGA CGCTGACCAC GCCGGCCGGG CCGGATGCCT TGCTGGCCGA AACGGCCAGC
ATTGACGAAG CCCTCGGCCC GGTTGCAGAG CACGCCGGTT ATCGCATCCA ATTAACGGTT
CTGACGGCCA ACGCCGAGCA ATCCCTGACC GCCTTGCTCG GCCAGCCAGC CCGTCTGGAC
CTGCAAACCA GTGCCTTGCG CACAGTGCGG CGGCCTTTCC ACGGTCACAT TACGCAAGTC
ACCCGTCTTG GTGCCAACGG CGGTTTCGCC CGTTACAAAC TGATCATCGA ACCCTGGCTC
GCCTTCCTTG GCCACAATCA GGACAACTAC CTGTTTCAGG ACAAGAGCGT CATCGAGATC
ATTGACGAAC TGCTCGGCGA CTGGAAGTCC CAAGGCAAGC TCGTTCCCGA CTGGCGCTGG
GTCCTGGCTG ACACCGCCGC TTACCCCAAG CGCGGCATGA CCGTGCAATA CCGCGAAAGC
GATCTCGCTT TCCTCAAGCG TCTGCTGGCC GAAGAGGGGT TGTTCTGCTG GTTCGAACAC
CAGGCTGAAG AAGGCGACAC CCTGGGTAAG CACACCCTGA TCATCGCTGA CCATAACGGT
GCCTTCACCG ATAACACGCA ACCCCGCATC CGCTTCACCC AGGCCGGCGC AACGCTCTCC
GAAGACAGTC TCGACCGCTG GCACGGCCTG CGCCAGCTCG ACACCGTCGA AACCAACGCC
AGCAGTTGGG ATTACCGCAG CCTCTCGACC CGGCCGCAAG GCGCCCGCAG CAGTATCGAC
AGCGGCAGCC TACCCAAGAC CGCTGCCTGG CACGACCCCG GCCAATACGC CTGGCAGAAC
AGCGCCCACG GCGAACGTAT GCTCGGCAAC CAACGCCAAG CTATCGATGC GCGAATGAAA
CAATTCGACG GCCAAGGCAC CGTCCGTAGC GCCGCCCCCG GCACCACCTT CAGGCTGGCC
GACCACCCCG AACACGACCT CGACGCCCCG GAACAACGCA AGTTCCTGAT CACCGCCGTC
AGCCACCAAG CTCGTAATAA TCTGGACGAA ACCGTCAATG GCGAACAAGG CCGGGAGCAG
GGCAGCGAAC AAAGCGTCGA CCTCTACCGC AACCAGATCA CCGCCATCCG TGCCAGCATC
CCCTGGCGCC CCTTGAGCTC GGACAGCCAC GGCCGGAACA TCCACCCGCG CCCGACCATC
AACGGCACGC TGACCGCTGT CGTCGTCGGC AACGGCCAAC CCACCCACAC CGACCGTGAC
AGGCGCGTCC GCGTCCAGTT CCCCTGGCAA CGTGGTGCCC AATCCGCCGG GCGCAGCGAA
CACCCCACCG GCGCGGACAA CGGTCCGGCC AGCGACGCCC TTGGCGTCTG GCTCCGCGTC
ATGACCCCCG TCGCCGGTGC CAACTGGGGC GGCCACATGA CCCCGCGCCC CGGCCAGGAA
GTCCTCGTCG CCTTCCAGAA CGGCAACATC GACCGCCCGA TCATCATCGG CACCGTCTAC
AACGGCAGCG GCAACACCGA CGCCCAAGGC AACCAGCAAG CCGGCAGCAC CCTGCAAGCC
AGTGCCAATG CCCCCGCCTT CTTCGCGGGC AAGGAAGCCG AAGCCCACAC CCACAACGCC
AGCCTCTCCG GCCTCAAAAG CCAGCAACTC AATGCCAGCA AAACCGGGCA GGGCGGCTAC
AACCAACTCG TCTTCGACGA CACCCCCGGC GAATCCCGCA TCGAAGTCTC TACCACCGAA
TACCAGAGCA TTCTCCAACT CGGCCACCTC AAACAACAAA GTGACAACGC CCGCCAAGCC
GACCGTGGCC ACGGCGCCGA ACTGGCGACC CAGTCTGCCA GCGCCATACG CGCCGGCAAC
GGCCTCCTGA TCAGTGCCGA TGCCCGCCCC AATGCCAGCA GCAGCCACCT CGACAGCCGC
GAACCCATCG CCCAGACCCA GGACGCCCAA AGCCTGACGC AAAGCTTGGC GGAGGTCGCC
GCCAAACAAA ACGCCGCCCT CAAAGGCGAC CCCCAAGCCG ACAAACTCCC GGCCAGCGAA
GCCCTCAAAC ACGCCATCGA CGTCATGAGC GCCACCGCGA CTCAAGGCCA AACTCAAGCC
GGCAGCGACA CCATCAAAGC CACCCTCGGC GGCACCGGTA CCGTCCCCGC CTGGTCAGAA
CCGCGCATTC AATACAGCGC CCCGGCCGGC ATCGCCCAAC TCACCCCGCA AAACCACATC
CTCGCCGCCG GCAAACACCT CAGCATTGCC ACCGGACAGG ACACCAACCT CATCGCCCAA
GGCCACCACA GCCTCTCCGT CAAGGATGGC ATTGCCCTCT TCACCGTCGG CAAAGCCAAG
GGCAAAAACA AACCCAACAC TGAAACTGGC ATCCACCTCC ACGCCGCCAG CGGAAGCGTC
AGCCTGCAAA GCCAAAGCGG CAAAACCACC GGTGCTGCCG ACAAGAAAGT GACGATCGCC
AGCACCACCG GTAACCTCAA CGCCAGTGCC AAACAACACA TCCTCGCTAT GGCCCAAGGG
GCTTACCTGA AGATCGAGGG CGGGAATATT AGCCTGCATG CACCGGGCAA GGTGGAACTG
AAGGCGAGTC AAAAGAATTT GACGGGGCCC AAGAGTGCTT CAACAAACTT GCCGGCCTGG
AACGTTGGCG AACTGAACTT GGCCAATTCT CCTGAGCGAA AAGCAACCTG CCTCCAGGCG
GCAAGCCGTA GCGGCGCTGC ATTCGTTCAA CTGGATAAGT AA
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| Protein sequence | MTMNSFLDLI SGGAAWRQTD RLLTLTTPAG PDALLAETAS IDEALGPVAE HAGYRIQLTV
LTANAEQSLT ALLGQPARLD LQTSALRTVR RPFHGHITQV TRLGANGGFA RYKLIIEPWL
AFLGHNQDNY LFQDKSVIEI IDELLGDWKS QGKLVPDWRW VLADTAAYPK RGMTVQYRES
DLAFLKRLLA EEGLFCWFEH QAEEGDTLGK HTLIIADHNG AFTDNTQPRI RFTQAGATLS
EDSLDRWHGL RQLDTVETNA SSWDYRSLST RPQGARSSID SGSLPKTAAW HDPGQYAWQN
SAHGERMLGN QRQAIDARMK QFDGQGTVRS AAPGTTFRLA DHPEHDLDAP EQRKFLITAV
SHQARNNLDE TVNGEQGREQ GSEQSVDLYR NQITAIRASI PWRPLSSDSH GRNIHPRPTI
NGTLTAVVVG NGQPTHTDRD RRVRVQFPWQ RGAQSAGRSE HPTGADNGPA SDALGVWLRV
MTPVAGANWG GHMTPRPGQE VLVAFQNGNI DRPIIIGTVY NGSGNTDAQG NQQAGSTLQA
SANAPAFFAG KEAEAHTHNA SLSGLKSQQL NASKTGQGGY NQLVFDDTPG ESRIEVSTTE
YQSILQLGHL KQQSDNARQA DRGHGAELAT QSASAIRAGN GLLISADARP NASSSHLDSR
EPIAQTQDAQ SLTQSLAEVA AKQNAALKGD PQADKLPASE ALKHAIDVMS ATATQGQTQA
GSDTIKATLG GTGTVPAWSE PRIQYSAPAG IAQLTPQNHI LAAGKHLSIA TGQDTNLIAQ
GHHSLSVKDG IALFTVGKAK GKNKPNTETG IHLHAASGSV SLQSQSGKTT GAADKKVTIA
STTGNLNASA KQHILAMAQG AYLKIEGGNI SLHAPGKVEL KASQKNLTGP KSASTNLPAW
NVGELNLANS PERKATCLQA ASRSGAAFVQ LDK
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