| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2106 |
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| Symbol | |
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| ID | 3567002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2268611 |
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| End bp | 2274850 |
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| Gene Length | 6240 bp |
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| Protein Length | 2079 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637680579 |
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| Product | filamentous haemagglutinin, N-terminal |
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| Protein accession | YP_285319 |
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| Protein GI | 71907732 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0197473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCGCA CATATCGCGT TGTCTGGAAT CACGTGAAAA ACACGTGGCA AGCCGTGGCT
GAATGCGCTC GAGGTCGAGG CAAAACCAAG TCGGAAAAAC TCATGACGGT TGCGGTTGCT
GCTGGCTTGT CGCTGCTCGG CGCGGATCAA GCGCTTGCTG CCGGAACCTT ACCGACAGGC
GGCAACGTAG TGGCTGGCAC TGGCAGCATT AGCCAGAGCG GCAACGCGAT GACGATCAAC
CAGTCCTCCA GCAAGCTGGC AATCGACTGG CAAAGCTTTT CCGTTGGGCA AGGCTACCAG
GTCAATTTCG TTCAGCCCGG CGCGAATGCC GTGGCGCTGA ACCGCGTGCT TGGATCCGAT
GTTTCGGTCA TTCAAGGGTC GATCAAAGCA AACGGACAGG TATTTTTGAT TAACCCGAAC
GGGGTGCTTT TTTCCCCGAC GGCCCAAGTG AATGTCGGCA GCCTGCTGGC ATCGACCTTG
AACATGAGTA CCGCCGATTT CATGGCCGGC AACTACAAGC TATCGGGTAC GAGCAGCAAT
GCCGTTGTAA ATCAGGGCAA CATTACTGCC GTGGGAGACG GCGGCAAGGG TGGCAGCATC
GCGCTGATCG CCGCCAAGGT GAGTAACGAA GGCAATCTGG CAGCCACCGG CGGCAACGTG
TTGATGGCAG CGGCCAGCAG CGTGACGCTT GATCTCGGCG GCCCGGTCAA GCTTCAGGTC
AATCAGGGAA CACTGGATGC GCTGGTGGAA AATGGCGGCG CCATTCAGGC GGACGGGGGA
TTCATTTACC TTACCGCCAA GGCGGTCAAT GAACTGACCA GCGCTACCGT CAATAACACC
GGAACGGTCC GGGCCCAGAC CCTGGCGACA GGCGAAAAAG GCGAGATCCG GCTGATCGGG
GATATGAGCC ACGGCACGCT CAACGTTGGC GGCACGCTGG ATGCGAGCGC ACCGCGCGGA
GGCGATGGCG GCTTCATCGA AACCAGCGCG ATGACCGTCA ACATGGCAGA CGGTTTGGCC
GTCACCACCC TGGCGCCTTA TGGCAAGACA GGAACCCTGC TGGTCGATCC GAACAACTAC
ACGGTCGCGG CAAGCGGTGG CAACGCAACC GGCGCTTCGT TCACCAGCCT GATCAACAGC
AACAACGTAA CGATTTCAAC GGCGAGCTAT GGCACGGCCG GCGGCAGCGG CGACATCTTC
ATTAACGACA ACATCACCAA AACCGCGGCT GCCGGCACCA CTTCGCTGAC CTTCCTGGCA
GAGCGCAACA TTGAGGTCAA TGCTTCGATC ACCTCCATCG GCGCACCGCT CAATATCGAA
CTGAGCGCCG CCAACAATGC GTCCGGAACC TTGGGCGGCG TGCAGATCGT CAGTGGCAAG
ACGCTGAACT CAAACGGCGG CAATATCCTC ATCGGCGGTG CCGGCGGTAG CGTGGCGGGC
GCCCAGACGC TTTCCCACGG CATCGGCTAT GCCCTGAACT ACTCCGCGAG TCAGGAGGCT
GTATCCATCG GCTCCAGCGC CAATATCCTC TCCCGTGGTG GTGACATCAC GATTAACGGT
TATTCCAATC AACCGGTTGC CGGTAACAGC GACACGACCG GCGTGCACGT CGGCGCCAGT
GCAGTGATCG ACAGCGGTTA TTACGCGCCA TCGGCAACCA CGGCGTCGTA CGGTGGCTAT
ATCAACATCT CCGGCAAGTA TGTTGGCGGT GTCGGCGGCA ATTCCAACAA GGTCTTTGGC
GTAAAGATTG ACAACCCGAG CGGCGGCGGT GGGCAAACGA CCATCTCCGC CTCCACGACT
ACCGGCGCCA TTCGTATTGA AGGTAGCAGC ACCTACGACA CACCGGGGAC TTACGCACTG
AACATGGCGA CCAACGGTCT GGCCGGTAAC ATTTATTTCA ACGCCTATTC TGTCGCCGAC
CTGATTTTCA TCTTGAACGG TGGCCTCACG GGTGCCACCT TCACGTACAG CCCGCCAACC
TCCGGTTGTC GTACCGGCTA TCCAAATTGC GGCATGCTGT TTGTCAGCGG CGCCAACAAT
TCCTACCTTT ACGCCACTTA CAACGCCGTC AATATGTCGA CGCTGCCGGT CTACGTATCG
GCCACACTGA CGGGCACAAA AGCCTATGAC GGCACACTGG CAGCAACCAA TCTGGGGTTC
AGCAACATCA GTATCCTGGA TCCCAACACG TCCGGTTACT CAAGTGCCAA CGTTACTTCG
GCCTCTTATG TCACGCCTGG CGCCAACGTT GGTGCCTATT CCAATCTGTC GGCCAGTTCG
CTGTCGCGCA ATTACACGGC TAACGGAAAC ACCTACGTCG TGGGCTACAA CTTCACGGTT
TCACCCAGCT ACACCATTAC CCCGGCCACG GCCACGCTGA GCGCCGTCAA AACCTACAAC
GGTGATGCCA GCTTCAGCAG CGCTCAGATC ACCGCATCCG GCGTCAATGG GGAAACGCTT
GCGCTCACCG GTAGCGGCCC TGCCACGGCA AATTCATCTC AGGTGACGGA CAACACAACC
AACTTCCTGA CTGCCCTGGG CGGCCTGACC CTCGCCAACG GTGCTTCCGG TACAGCCGGC
CTGGCCAGCA ACTACGTCCT GCCGTCGCTA TCGGCACGGA GCACCCAGAA CACCGCGACG
ATCAATCCGT TTGGCGTGAC GGTTATCGGC GTTGGCGGCA GCAAGAATTA CGATGGCACG
GCGACCTTCA GCGCCAGCCA ACTCAACCTC GGCGCCGGCG TAGCCGGTGG CGACAGCGTC
GCGCTGGCCG GCAGTGCCGA CGTAGCGAGC AAGAACGTCG GCACCTATAC CCAATGGACT
TCGTCGAGCC TGTCGCTGAC CGGCACCCAG GCATCCAACT ACACGCTGAC GGGCGGCGCC
GTATCGGCCC TCATCAACCC CGCACCGTTG GGTGTGGCAG TCAATGCTGT TTATAACGGC
ACCAATGCCT TCGTGAGCAC CGGCGGTGCC ACGAATGCCA GCGCCGGAAC GATTGGCACC
GGCGGCACGC TTGCAGTCAC AGGTTTGGTT GGTAGCGAAA GGCTCACCGG CGTGACCGTT
TCCGACGCCA ACGTCGATGT GGTGACCGGT AACAAGTACG TCACCGGCAC CGTCGGCAGC
AATGGCTTCC TGGCTAGCAA CTACGCCTTG TACAACGCAG GCACCCCGAC TTACAACGTC
AGTACGGTTG GCAACGCGAT CACGACCAGC AACAACACGG TCAGCATCAC CCCGGCACCG
TTGGGAATTG CCGCGGCGCC CACTTACAAC GGTTCGACCG GCTTTACCGC CTCCTCCGGC
GTTCCGGATA ACGGTACCGG CAGCCTGACC ACTGGCGGCA ACGTTACCGC CGCCGGTCTG
GTCAATGGGC AAACCCTGGG CGGCTTCACG CTCGACAACG CCAACGTCGT GGGCGCCACC
AAGGTGACGG GGGTTACGCT CAATGGCGGC ATCGACGCCC GCAACTACGT TCTGAACGGC
GCCACGTTCG GCAGTGCCTC GTCGGTCGTT GCCGGCGGCG CAACCGACGG CTCGGCCGCC
ACCAACGTGG TTGCGCTCGC CGCGGCGCCA CTGGGCGTTG CCATCGGCGG CACCTACAAC
GGCACCACCA GCATCGCCCC GACCTCGTTC AGCCCCTACG GCCTGCTCGG TAGCGACACC
ATCACCGCGC TGACCAGTGC CACAATCAAC AGCCCTAACG TCTATGCCAA CGGCAGCAAT
TTCGTCAAAT CAATCGTGGT CGGCAGCGGC AGCACCGATA TCCGCAACTA CGCGATCAAC
CAGACTTACA ACGCCACGCT GGATATCAAC GGCAACGCCA GCAGCACCAC AACCAGCGTT
GCCACGCTGG TCCGCGCCCC GCTGGGCGTT GCTGTAGCCG GCACCTACAA CGGCACGAGC
ACGGTATCGA CGGCTGACGG CGCGACGATC ACGGGCTATG GCCTGGTCGG TCAAGACTCA
GACAGCAGCC TGAACACGGC GACGCTGGAT TCGAAGAACG TCGCCAGTGC CAGCAAGGTT
GTCTCGCTGA GCGGCACCGG CACCTTCGAT CTGCGCAACT ACGTGCTCGA CGGTTCAGTG
AATACGACGC CGGCCACGGC CGGTAGTGCG CTGGATGGCT CCGGGGCGAC CAATACCGCC
GCCCTGGCCA GGGCCGCCTT GGGCGTGGCC ATCAATGGCA CGTACAACGG CACGACCAGC
TTTACTTCGA GCAACGCCAC GATCACGACC AACGGTCTGG TCGGCGGCGA CACGCTGACC
GGCGTGACGG TGCATGACGC CAATGTCTTC AGCAACGGCG GCAACTACAT CACCGCCCTG
ACAGGTGGCA CGGCCAGCCT GGCGAACTAC ATTCTCAGCG GTACTACCAA CACGACCACC
AGCGGCGCGA CCATCTCCAC GGCACATAAC AATGCCACGC TGGTCCGTGC CCCGCTGGGC
GTTGCTGTAG CCGGCACCTA CAACGGCACG AGCACGGTGT CGACGGCTGA CGGCGCGACG
ATCACTGGCT ATGGCCTGGT CGGGCAGGAT GCGAGCATCA GCCTGAACAC GGCGACGCTG
GATTCGAAGA ACGTGGCCAG TGCCAGCAAG GTTGCCTCGC TGAGCGGCAC CGGCACCTTC
GATCTGCGCA ACTACGTGCT CGACGGTTCG GTGAATACGA CGCCGGCCAC GGCCGGTAGT
GCGCTGGATG GCTCCGGTGC GACCAATACC GCGACCCTGG CCAGGGCCAC CCTGGGCGTA
GCCGTCAATG GCACGTACAA CGGCACGACC AGCTTTACTT CGAGCAACGC CACGATCACG
ACCAACGGTC TGGTCGGCGG TGACACGTTG ACCAGCGTGA CGGTGCATGA CGCCAATGTC
TTCAGCAACG GCAGCAACTA CATCACTGCA TTGACGGGGG GCACGGCCAG CCTGGCGAAC
TACACTCTCA GCGGTAATAC CAACACGACC ACCAGCGGCG CGACCATCTC CACGGCGCAC
AACAATGCCA CGCTGGTCCG CGCCCCGCTG GGCGTGGCAG TGAGCGGCAC CTACAACGGC
ACGAGCACGG TATCGACGGC TGATGGCGCA ACGATCACGG GCTATGGCCT GGTCGGTCAA
GACTCAGGCA TCAGCCTGAA CACGGCGACG CTGGATTCGA AGAACGTCGC CAGTGCCAGC
AAGGTTGTTT CGCTGACCGG CACCGGCACC TTCGATCTGC GCAACTACGT GCTCGACGGT
TCGGTGAACA CGACGCCGGC CACGGCCGGT AACGCGCTGG ATGGCTCCGG TGCGACCAAT
ACCGCGACGC TTGCTCGCCG AGCAATCACC GTTGCCGCAG ACGACCAGCA GAAATTCGTC
GGCGACACCG ATCCCGGGCT GACGTACCAA ATCGCCAGCG GCTCATTGGC CGCCGGTGAC
AGCCTTGCCG GCAGCCTCGC CAGGGCCTCC GGCGAAAGTC TGGGGCAATA CGCCATTCAC
GCAGGATTGA ACAACAGCAA TTATGCGATC ACCGCGGTTG ACGGCAAGCT GGACATCCTG
GCTCGTAACG AGCCCCCCCC GCCGCCTAAC CCGATCATTG TGCCCGCGTT CATTGACAAC
GGTTCGTCGG CCCTGAGCGC AGCGGTCAGA CCGGCGAGTT TTGGCGGCCT CAGCTACGTT
CCTGTCGGCG GCGGGCAAAG CGCTGGATCC GTCGCGCAAA GCGGTGCCAG TGGCGATCAG
GCGCAGGCAG GACGTTCTTC TCTTAACTTT GTCGGCAATA CCTCGACAGA GGTTGCTGGC
AATGGCGCTG GCGTTCAGCC GAACAATCCA GCAGCGGGTG GTAGTGAGCA AACCACTGGC
ATTCGTTCTG CACTGTCCGA CGTGACGAAC AATTCGGCTG ACACCAACCT TGCCGCAGCT
AATGGCACAT CAAGCAACGC CGGTGGAGAT GCAACAAGCA ATCGTACCGG CAGCGGCACT
AGCAGCCAGG CTGGCAACTC GGGCGAAGAG CGACGCCTGG CCGCAGAAGG CAACGGAGAG
CAGCCAACCG GATCGCGCTC GACCTTGAAT TTCGTGGGTG ACGATTCGGC CGAAGGCAAA
CTAGCCGCCG ATCGCACCGG CAATCCCCCA GCAGAGGCTG GCAAGCGCAA GGCGGCTCAG
GAACTCAACG TAAACAACGT GACAGTACCC AGCTCTTCCG GTCCGCTCGA TGTATTCGTT
GTGGATAGCG GCATCAACAT TGCTCGCACG GTAACGCTCG ATTTGCTGAA CAATCGTTAG
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| Protein sequence | MNRTYRVVWN HVKNTWQAVA ECARGRGKTK SEKLMTVAVA AGLSLLGADQ ALAAGTLPTG
GNVVAGTGSI SQSGNAMTIN QSSSKLAIDW QSFSVGQGYQ VNFVQPGANA VALNRVLGSD
VSVIQGSIKA NGQVFLINPN GVLFSPTAQV NVGSLLASTL NMSTADFMAG NYKLSGTSSN
AVVNQGNITA VGDGGKGGSI ALIAAKVSNE GNLAATGGNV LMAAASSVTL DLGGPVKLQV
NQGTLDALVE NGGAIQADGG FIYLTAKAVN ELTSATVNNT GTVRAQTLAT GEKGEIRLIG
DMSHGTLNVG GTLDASAPRG GDGGFIETSA MTVNMADGLA VTTLAPYGKT GTLLVDPNNY
TVAASGGNAT GASFTSLINS NNVTISTASY GTAGGSGDIF INDNITKTAA AGTTSLTFLA
ERNIEVNASI TSIGAPLNIE LSAANNASGT LGGVQIVSGK TLNSNGGNIL IGGAGGSVAG
AQTLSHGIGY ALNYSASQEA VSIGSSANIL SRGGDITING YSNQPVAGNS DTTGVHVGAS
AVIDSGYYAP SATTASYGGY INISGKYVGG VGGNSNKVFG VKIDNPSGGG GQTTISASTT
TGAIRIEGSS TYDTPGTYAL NMATNGLAGN IYFNAYSVAD LIFILNGGLT GATFTYSPPT
SGCRTGYPNC GMLFVSGANN SYLYATYNAV NMSTLPVYVS ATLTGTKAYD GTLAATNLGF
SNISILDPNT SGYSSANVTS ASYVTPGANV GAYSNLSASS LSRNYTANGN TYVVGYNFTV
SPSYTITPAT ATLSAVKTYN GDASFSSAQI TASGVNGETL ALTGSGPATA NSSQVTDNTT
NFLTALGGLT LANGASGTAG LASNYVLPSL SARSTQNTAT INPFGVTVIG VGGSKNYDGT
ATFSASQLNL GAGVAGGDSV ALAGSADVAS KNVGTYTQWT SSSLSLTGTQ ASNYTLTGGA
VSALINPAPL GVAVNAVYNG TNAFVSTGGA TNASAGTIGT GGTLAVTGLV GSERLTGVTV
SDANVDVVTG NKYVTGTVGS NGFLASNYAL YNAGTPTYNV STVGNAITTS NNTVSITPAP
LGIAAAPTYN GSTGFTASSG VPDNGTGSLT TGGNVTAAGL VNGQTLGGFT LDNANVVGAT
KVTGVTLNGG IDARNYVLNG ATFGSASSVV AGGATDGSAA TNVVALAAAP LGVAIGGTYN
GTTSIAPTSF SPYGLLGSDT ITALTSATIN SPNVYANGSN FVKSIVVGSG STDIRNYAIN
QTYNATLDIN GNASSTTTSV ATLVRAPLGV AVAGTYNGTS TVSTADGATI TGYGLVGQDS
DSSLNTATLD SKNVASASKV VSLSGTGTFD LRNYVLDGSV NTTPATAGSA LDGSGATNTA
ALARAALGVA INGTYNGTTS FTSSNATITT NGLVGGDTLT GVTVHDANVF SNGGNYITAL
TGGTASLANY ILSGTTNTTT SGATISTAHN NATLVRAPLG VAVAGTYNGT STVSTADGAT
ITGYGLVGQD ASISLNTATL DSKNVASASK VASLSGTGTF DLRNYVLDGS VNTTPATAGS
ALDGSGATNT ATLARATLGV AVNGTYNGTT SFTSSNATIT TNGLVGGDTL TSVTVHDANV
FSNGSNYITA LTGGTASLAN YTLSGNTNTT TSGATISTAH NNATLVRAPL GVAVSGTYNG
TSTVSTADGA TITGYGLVGQ DSGISLNTAT LDSKNVASAS KVVSLTGTGT FDLRNYVLDG
SVNTTPATAG NALDGSGATN TATLARRAIT VAADDQQKFV GDTDPGLTYQ IASGSLAAGD
SLAGSLARAS GESLGQYAIH AGLNNSNYAI TAVDGKLDIL ARNEPPPPPN PIIVPAFIDN
GSSALSAAVR PASFGGLSYV PVGGGQSAGS VAQSGASGDQ AQAGRSSLNF VGNTSTEVAG
NGAGVQPNNP AAGGSEQTTG IRSALSDVTN NSADTNLAAA NGTSSNAGGD ATSNRTGSGT
SSQAGNSGEE RRLAAEGNGE QPTGSRSTLN FVGDDSAEGK LAADRTGNPP AEAGKRKAAQ
ELNVNNVTVP SSSGPLDVFV VDSGINIART VTLDLLNNR
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