Gene Daro_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2030 
Symbolera 
ID3566748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2182058 
End bp2182942 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content54% 
IMG OID637680501 
ProductGTP-binding protein Era 
Protein accessionYP_285245 
Protein GI71907658 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.0924182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCCGTTCCGG TTATATCGCC ATCGTTGGCC GCCCCAATGT CGGAAAGTCG 
ACCCTGCTCA ACCGGCTGGT TGGTGAAAAG ATCAGCATTG TCTCGCGCAA GGCACAGACT
ACCAGGCACC GGATCACTGG TATTCTGACC AACGACGACG CACAGTTCGT TTTCGTCGAT
ACACCGGGTT TCCAGACCAA ATTTTCCAAC GCGCTGAATC GTGCGATGAA TCGAGGCGTC
ACCCAGACGC TGAACGACGT CGACGTCGTA CTCTTTCTGA TCGAAGCTGG GCGCTATGAC
GCCAAGGACA AGGCGGTAGT CAGGCTCCTG CCCAAGGACA GGCCGGTTAT TCTGGTTGTT
AATAAAACGG ACCAGATCAA GGATCGCAGC TCCCTGTTTC CGTTTCTCGC TGAAGTGTCT
GCCGATCACG ATTACGCCGC GGTAGTGCCG ATCAGTGCCG CCAAAGGAAA GCAAACTGAC
GAATTGCTGG CTGAGGCAAG GAAACATCTG CCCAATGAGG GATTGATGTT CCCGGAAGAC
GAATTGACTG ATAAAAGTGA GCGTTTCCTG GCCTCCGAAT ACATCCGTGA AAAGGTTTTT
CGCCTGCTTG GTGACGAACT TCCGTATGCC ACTGCCGTGG AAATCGAGAA ATTCGAGGTT
GAAGGCGACC TGCGCCGGAT ATTCGCGGCC ATCGTTGTCG ACCGGGAGGG GCATAAGGCC
ATTGTGATTG GCAAAGGGGG AGAGTCGCTG AAACGCATCG CCAGCGAAGC TCGTCAGGAT
ATGGAGCGCC TTTTTGGCAG CAAGGTTTAT CTTGAAATCT GGGTCAAGGT GAAGTCTGGC
TGGAACGATG ACGAGCGCCT GCTGAAGAGT CTCGGTTACG AATGA
 
Protein sequence
MKKIRSGYIA IVGRPNVGKS TLLNRLVGEK ISIVSRKAQT TRHRITGILT NDDAQFVFVD 
TPGFQTKFSN ALNRAMNRGV TQTLNDVDVV LFLIEAGRYD AKDKAVVRLL PKDRPVILVV
NKTDQIKDRS SLFPFLAEVS ADHDYAAVVP ISAAKGKQTD ELLAEARKHL PNEGLMFPED
ELTDKSERFL ASEYIREKVF RLLGDELPYA TAVEIEKFEV EGDLRRIFAA IVVDREGHKA
IVIGKGGESL KRIASEARQD MERLFGSKVY LEIWVKVKSG WNDDERLLKS LGYE