| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1988 |
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| Symbol | |
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| ID | 3570237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2137756 |
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| End bp | 2139843 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637680459 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_285204 |
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| Protein GI | 71907617 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.407024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATC TTTCGCGTTA TTTCTCGACG GTCAGTTTCA TCCTAATCGT GTTGGCAGCG
GGGGTACTTG GCCCTCTGTA CCAACGGCTT TCGCTGCTGC AGATGCAGAA TCTGGCGGAG
AGCCGAAATA TCGCCATGGC GCAGGTTTTC CAGAATTCGC TGCACACACA ACTGGAGTCG
CTGATCAGCG ATGCCGTCGG CCGGGACATC CATTCAGGCC AGGTCACCGA TGACATCCTT
CAGTTGCAGG CCACGGTGCA TGATCTGATG CGGGATACCT CCGTGATCAA GGTCAAGGTC
TACAACCGCC TGGGAAGTAC CATTTTCTCG ACGGATACCA GGCAAATTGG TGATAGCCAG
TTGCAGAACC CGGGCTTCCG AGCGGCGATC AGTGGTTTGG TAACCAGCGA GTTGATACAT
CGAAACACCA TCGATGCCTT CGAAGGGCAG TTGGTCGAGG TCGATGTCCT GTCGAGCTAT
ATTCCCATAC TCGGCAAAGA ACACGCGGTC GAGGGCGCCT TTGAGCTCTA TCAGAACGTC
ACTCCCTTTG TTACCCAGTT GAACCGCAAT CTGTGGTGGG TGACGGCCGC CGTGGTGCTG
GTGTTCGCCG CGCTCTACCT GATGCAGTTC CTGGTTGTTC GGCGGGCCCA AGGTATTCTG
GAAGACCAGG AGGGGCGCAT CAAGGCGGCG CGCGATACGC TGGAGATTCA GGTGGCGGCC
CGTACGGAAG AATTAAAGCG GACCAACAGC CAGCTTGAGG GCGAAATTTC GGAGCGGCGG
CAGGCGCAAA GCAAGCTCAA TTATCTGGCT TATCACGATC CGCTGACCGG CTTGGCCAAC
CGTCGCTGTT TTATCGAACG ACTCGAGGAA AGTCTCAGCG AAGGCGAGCG CCATGGCGAA
AAACTGGCCG TCTTGTACAT CGATCTCGAC CAGTTCAAAC AGGTCAACGA TTCCCTTGGC
CATGGCGTTG GCGACGAACT GCTTGTTTCG GTCGCCGCCC GCCTGTCTGA GCACGTTCGG
CTGATCGACA TGCTGGCCCG CCTGGGGGGG GACGAATTCA TCTGCCTGAT GGAGGCCGCG
CGCAGCGAAG ATGAGGTCGA ACTTCTGGCT CGCGAAATCA TTGCTGCGTT CGAATACCCG
TTCAAACTGG GCGACCATGA ACTCTTTCTG ACGGCATCGG TCGGCATCAG TCTTTGCCCC
AGTGACGGCA ATAGCGTGCT TGATCTGATG CGCAATGCCG ATACGGCCAT GTATCGGGCC
AAAATGCTGG GCCGCGGCAA TTTCCATTTT TATACGGCCG AAATGACCCG GGAGGCCCAG
GAGCGTATCC AGATGGAAAA TCTGCTGCGG CGCGCCCTCG ACAACGGGGA ACTGTCGGTC
CATCTGCAGC CACAGGTTGA TTCCCGGAGT GGTCAGCTGG TTGGTGCAGA GGCCCTGGTT
CGCTGGAACA GTCCGGAGCT CGGACAGGTC ATGCCGATAC GCTTTATCCC ATTGGCTGAG
GACTCGGGGT TGATAATCGG ACTCGGCAAC TGGGTCTTGC GCGAAACCTG CCGCCAGTTC
ATGCAATGGC GGATGAGCGG TTTCGAGTTG CCGCAGGTTT CGGTCAATCT CTCGGTCAAG
CAGCTGGAGC GCCCGGAATT CATCGACGTG CTGGACAAAA TACTCGACGA AACCGGTATG
GACCCGACCC TTCTCAAGCT GGAATTGACT GAATCCGTGG TCATGGCCGT CGGTGATGCC
TTTACCCCGC TTGAACGCTT GCGCGATCTC GGGATCAGCT TGGCGCTGGA CGATTTCGGC
ACCGGTTATT CGTCTCTCAG CTATTTGAAG ATGCTGCCGG TCCAGCAACT GAAGATTGAT
CGCTCGTTTG TTGAGGGCAT TGGCCGAAAT TCTGGCGATG AGGCCATCAT CCGGACCATC
ATGGAACTGG CCAGGAGTCT TGGTTTTGAG GTGGTGGCGG AAGGCGTTGA AACCGTCGAG
CAAGCCAACT TTCTGGCTGA TCTTGGGTGC GAGCAGTTGC AGGGTTTTTT GCATGGACAG
GCGGTGAGCC CCGTGGAGTT TCGCGCCCGC TGGTCTGTTC GCCCATGA
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| Protein sequence | MFNLSRYFST VSFILIVLAA GVLGPLYQRL SLLQMQNLAE SRNIAMAQVF QNSLHTQLES
LISDAVGRDI HSGQVTDDIL QLQATVHDLM RDTSVIKVKV YNRLGSTIFS TDTRQIGDSQ
LQNPGFRAAI SGLVTSELIH RNTIDAFEGQ LVEVDVLSSY IPILGKEHAV EGAFELYQNV
TPFVTQLNRN LWWVTAAVVL VFAALYLMQF LVVRRAQGIL EDQEGRIKAA RDTLEIQVAA
RTEELKRTNS QLEGEISERR QAQSKLNYLA YHDPLTGLAN RRCFIERLEE SLSEGERHGE
KLAVLYIDLD QFKQVNDSLG HGVGDELLVS VAARLSEHVR LIDMLARLGG DEFICLMEAA
RSEDEVELLA REIIAAFEYP FKLGDHELFL TASVGISLCP SDGNSVLDLM RNADTAMYRA
KMLGRGNFHF YTAEMTREAQ ERIQMENLLR RALDNGELSV HLQPQVDSRS GQLVGAEALV
RWNSPELGQV MPIRFIPLAE DSGLIIGLGN WVLRETCRQF MQWRMSGFEL PQVSVNLSVK
QLERPEFIDV LDKILDETGM DPTLLKLELT ESVVMAVGDA FTPLERLRDL GISLALDDFG
TGYSSLSYLK MLPVQQLKID RSFVEGIGRN SGDEAIIRTI MELARSLGFE VVAEGVETVE
QANFLADLGC EQLQGFLHGQ AVSPVEFRAR WSVRP
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