Gene Daro_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1962 
Symbol 
ID3567408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2109117 
End bp2109956 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content61% 
IMG OID637680433 
Productphosphoserine phosphatase 
Protein accessionYP_285178 
Protein GI71907591 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value0.436827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.668349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA TCATCCAGGG CGGCGCCCTA CCCACCTTTT TGCTCGAACG TATCGTCGCG 
GCGACCGGCG CCATAGCCGT CGAACCCCGA CCACCGCAGG TTGTCCGGCT GAAAGGTGCA
ACTCGCACCC CGGATTTCGA TGCCCTGATT CCGCTGATCG AAGCCGAGAA GCTCGACTGG
GCGTTCGCCG AAGCCGACAA GAAGCTGTCC GACTTCGGCC TGATCTGCTT CGACATGGAT
TCGACGCTGA TCACCATTGA ATGCATCGAC GAACTGGCTG ATTTCGCCGG CAAAAAGGAC
GAAGTGTCGG CCGTCACCGA AGCGGCCATG CGCGGCGAAA TCGATTACCG CGAAAGCCTG
CGCCGCCGCC TGTCGCTGCT GGCCGGCCTG GATGCCCGCG TCCTGGCCAG GGTTTTCGGC
GAACGCCTGC TGCTCTCACC CGGTGCCCGC GAACTCCTCG AAGCCTGCCA GAACGCTGGC
CTGCGCACCG CAATCCTGTC TGGGGGATTT ACCTATTTCA CCGAGCGTCT GCGTATCGAA
CTGGGTTTCG ACTTTGCTAC GTCAAACGAA CTGGAAATTT CCGGCGGCAA GCTGACCGGA
CGCGTCGTCG GCGATATTGT CGATGCCACC GCCAAGGCCC ATCACCTCGC TCGCCTGACC
GATGAACTGG GCCTGAAGAA GGAACAGGTC ATCGCCTGTG GCGACGGTGC CAATGACTTG
ATGATGATGG CCCAAGCCGG CCTGTCGGTC GCTTTCCGTG CCAAGCCGGC CACCCGTGCC
AAGGCCGACG TGGCCATCAA TTTCGGTGGG CTGGATTCGC TGCTCAATCT GTTCGACTGA
 
Protein sequence
MNLIIQGGAL PTFLLERIVA ATGAIAVEPR PPQVVRLKGA TRTPDFDALI PLIEAEKLDW 
AFAEADKKLS DFGLICFDMD STLITIECID ELADFAGKKD EVSAVTEAAM RGEIDYRESL
RRRLSLLAGL DARVLARVFG ERLLLSPGAR ELLEACQNAG LRTAILSGGF TYFTERLRIE
LGFDFATSNE LEISGGKLTG RVVGDIVDAT AKAHHLARLT DELGLKKEQV IACGDGANDL
MMMAQAGLSV AFRAKPATRA KADVAINFGG LDSLLNLFD