Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1950 |
Symbol | |
ID | 3567879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2102758 |
End bp | 2103975 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637680421 |
Product | cysteine desulfurase IscS |
Protein accession | YP_285166 |
Protein GI | 71907579 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00000000843977 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.404205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATGA AACTCCCCAT CTACCTGGAT TACTCGGCAA CCACCCCGGT CGACCCCCGT GTCGCCGAAA AAATGATTCC CTACCTCTGC GAGCATTTCG GCAATCCGGC GTCGCGTTCG CACAGCTTTG GCTGGGTCGC CGATGCGGCG GTCGAAGAGG CCCGTGAGCA GGTTGCTGCG CTGGTCAATG CAGATCCCAA GGAAATCGTC TGGACCTCCG GTGCGACCGA ATCCAACAAC CTTGCCATCA AGGGCGCGGC CAATTTCTAT GCCAGCACCA AGGGCAAGCA CATCATCACG GTCAAGACCG AGCACAAGGC CATTCTCGAT ACCGTGCGTG AAATGGAGCG CCAGGGTTTC GAGGCGACTT ATCTTGACGT CAAGGAAGAC GGTCTGCTTG ATCTGGAAGT CTTCAAGGCG GCCATTCGTC CGGATACCGT GCTCGCCTCG GTGATGTTCG TCAATAACGA AGTCGGTGTC ATTCAGCCGA TCGCCGAACT CGGTGAAATC TGCCGCGAGA AGGGCATCAT CTTTCACGTC GATGCTGCAC AGGCCACCGG CAAGGTCGAT ATCGATCTGA GCAAGCTGAA GGTCGATCTG ATGAGCTTCT GCGCCCACAA GACCTATGGT CCGAAGGGTA TCGGCGCGCT GTACGTCCGC CGCAAGCCGC GTATCCGTCT CGAAGCCCAG ATGCACGGCG GCGGTCATGA GCGCGGTTTC CGCTCCGGCA CCTTGCCGAC CCATCAGATC GTCGGCATGG GCGAGTGCTT CCGTTTGGCC AAGGAAGAAA TGGCTGAAGA GAACAAGCGC GTTGGTGCTC TGCGCGACAA ATTGCTGAAG GGCTTGCAGG ATATCGAGGC CACTTTCGTC AATGGTGACC TGACGCAACG CGTGGCGCAC AATCTCAACA TCAGCTTTGC CTATGTTGAG GGTGAGTCGA TGATCATGGC GATCAAGGAT CTGGCGGTTT CGTCCGGTTC GGCCTGCACC TCGGCCAGCC TGGAACCTTC CTACGTGCTA CGTGCCCTGG GGCGTGATGA TGAACTGGCT CACAGTTCCA TCCGTTTCAG CATCGGTCGC TTTACGACAG AAGAAGAAAT TGACTATGCA ATCAAATTGT TGCATCAGAA AGTTGGTAAG TTGCGCGAAC TTTCACCGCT GTGGGAGATG TACAAGGATG GCATCGATCT GAGCACCGTT CAGTGGGCAG CGCACTAA
|
Protein sequence | MTMKLPIYLD YSATTPVDPR VAEKMIPYLC EHFGNPASRS HSFGWVADAA VEEAREQVAA LVNADPKEIV WTSGATESNN LAIKGAANFY ASTKGKHIIT VKTEHKAILD TVREMERQGF EATYLDVKED GLLDLEVFKA AIRPDTVLAS VMFVNNEVGV IQPIAELGEI CREKGIIFHV DAAQATGKVD IDLSKLKVDL MSFCAHKTYG PKGIGALYVR RKPRIRLEAQ MHGGGHERGF RSGTLPTHQI VGMGECFRLA KEEMAEENKR VGALRDKLLK GLQDIEATFV NGDLTQRVAH NLNISFAYVE GESMIMAIKD LAVSSGSACT SASLEPSYVL RALGRDDELA HSSIRFSIGR FTTEEEIDYA IKLLHQKVGK LRELSPLWEM YKDGIDLSTV QWAAH
|
| |