Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1841 |
Symbol | |
ID | 3570089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1980393 |
End bp | 1981067 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637680312 |
Product | ABC transporter related |
Protein accession | YP_285057 |
Protein GI | 71907470 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 0.0297689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0173978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAC TCTCCAACAT CAAGAAGGCC TTCAACCAGA ACCAGCCCAA CGAATACTGG GCGCTGCACG GCATCGACCT GAGCATAGAA GCCGGCAAGG TCACCGCCTT CCGCGGCCCG AGCGGTTCGG GCAAGACCAC GTTGCTGACC ATCGTCGGCT GCCTGAGCCG GCCAACCAGC GGGCGCGTGC GTTTCAAGGG CGAGGATATT TCCGGACTGC CGGAGCGCTT CCTGACTGAC ATCCGCCGCC AGAGCTTCGG CTTCGTCTTC CAGCAGTTCA ACCTGATCAA GGGCCTGTCG GCGCTGGAAA ACGTCATCCT GCCGGCCTTT CCCACCGGGC GACCGCGTAG CGAACTGGTG GCGAAAGCGG GCGACATCTT CGACCAGCTC AAGCTCGGCC ATCGCAGCGC CGCCAAAGTC GAATGGCTGT CCGGCGGCGA GCAGCAGCGC GTCGCCATCG CTCGCGCCCT GATCAACGAT CCGGAAGTGA TCATTGCCGA CGAGCCGACG GCCAACCTAG ACACCGCGCT GTCAAAGGAA TTCATGGCCA TCCTCGAAGG CTTCACGGCA GCCGGCAAGA CGGTGTTGCT GACCAGCCAC GACCCGCTGG TTGTCGAGTC GAGTGCCGTG CATCGCGTCG TCGGCATGCG CGACGGCCGG TTGACCGAAG CCTGA
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Protein sequence | MIELSNIKKA FNQNQPNEYW ALHGIDLSIE AGKVTAFRGP SGSGKTTLLT IVGCLSRPTS GRVRFKGEDI SGLPERFLTD IRRQSFGFVF QQFNLIKGLS ALENVILPAF PTGRPRSELV AKAGDIFDQL KLGHRSAAKV EWLSGGEQQR VAIARALIND PEVIIADEPT ANLDTALSKE FMAILEGFTA AGKTVLLTSH DPLVVESSAV HRVVGMRDGR LTEA
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