Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1818 |
Symbol | |
ID | 3566072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1953453 |
End bp | 1955915 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637680289 |
Product | formate dehydrogenase alpha subunit |
Protein accession | YP_285034 |
Protein GI | 71907447 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.266188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAGTC TGGCTCCGAC ATTTGGCCGT GGCGCAATGA CCAATCACTG GGTCGACATC AAGAATGCCG ATGTCGTTTT GGTGATGGGT GGCAACGCCG CAGAAGCACA CCCGGTAGGA TTCAAGTGGG TTATTGAAGC GAAGAAGCAG AACAAGGCAA AACTCGTCGT TGTCGACCCG CGTTTCACGC GCTCGGCCTC GGTCGCCGAC TTCTACGCGC CCATCCGTAC CGGCACCGAC ATCGCCTTCC TGGGCGGCGT CATCAATTAC CTGTTGACCA ACGACAAGAT TCATCACGAA TACGTCAAGG CCTACACCGA CTTCAGTTTC CTGGTCGGCA ACGACTATGC CTTCGACGAC GGCATCTTCT CGGGCTACAA CCCGGAGAAA CGCAGCTACG ACAAGGCCAG CTGGAACTAC GTCAAGGGCG AGGACGGCTA CGTCAAGACG GACCCGACGC TGCAGGATCC GCGTTGTGTC TATCAACTGA TGAAGCAGCA CTACAGCCGC TACACGCCGG AAATGGTCGA GAAGATCTGC GGCACGCCGA AGGACGCCTT CCTCAAGGTC GCCGAAATGA TGGCCTCGAC GGCGACCGGC GACCGAACGA TGACCATCCT GTACGCGCTG GGCTGGACGC AGCACTCGCA AGGCTCGCAG ATGATCCGTA CCGGTGCCAT GGTGCAGATG CTGCTCGGCA ACATCGGTGT CGCCGGCGGC GGCATGAACG CGCTGCGCGG TCACTCCAAC ATCCAGGGCC TGACCGACCT CGGCCTGATG TCCAATCTGC TGCCGGGCTA CATGACCCTG CCGGGCGAGA AGGAGACCGA CTACGCGGCC TACATCGCCA AGCGGGCGCC CAAGCCGATG CGCCCCAACC AGATGTCCTA CTGGCAGAAC TACGAGAAGT TCCACGTCAG TCTGATGAAG TCGTGGTTCG GTGACGCCGC GACCAAGGAG AACAACTGGG GCTTCGACAT GCTGCCCAAG CTGGACAAGG TGCATGACGT CCTGATGGTG ATGGACGACA TGTACCAGGG CAAGATGAAC GGCTACTTCT GCCAGGGCTT CAACCCGCTC GCCTCGTTCC CGAACAAGGC CAAGCTGGGC GCGGCGATGG CCAAGCTCAA GTACATGGTC ATCATCGACC CGCTGGCCAC CGAGACTTCC GAATTCTGGA AGAACTACGG CGAGTACAAC GACGTCGATC CGGCCAAGAT CCAGACCACG GTCTTCCGCC TGCCTTCATC GTGTTTCGCC GAAGAAGACG GCTCGCTGGT CAGCTCCAGC CGCCTGCTGC AATGGCACTG GAAGGGCGCC GAGCCCCCCG GCGAAGCGAA GACCGATCCG GCGATCATGG CCGGCATCTT CATGAAGCTC AAGGCGATGT ACAAGGAAAA GGGCGGCGCC TATCCGGATG CCATCCTCAA CCTGACCTGG GCCTACAAGG ACCCGTACGA ACCGTCACCG GAAGAAGTTG CCAAGGAGTA CAACGGCAAG GCGCTGGTCG ACCTCTACGA CCCGAAGGAC CCGACCAAGC TGATCCGCAA GGCCGGCGAA CAGCTGGACA GCTTTGCCCT GTTGCGCGAC GACGGCACGA CGACCAGCGG TTGCTGGATC TTCAGCGGGG CATGGACGCA GGCCGGCAAC AACATGGCAC GGCGCGACAA CAGCGATCCG TGGGGCAACG GCCAGACCCT GAACTGGGCC TGGGCGTGGC CGGTCAATCG CCGCATCCTC TACAACCGCG CCTCCTGCGA TCCGAGCGGC AAGCCGTTCA ACCCGAAGCG CAAGCAGATC TGGTGGAATG GCACGGCGTG GACAGGCTCC GACATCCCCG ATTTCAAGGC GGATTCGAAC CCGGCCGACG GCATGGGGCC ATTCATCATG AACCCGGAGG GGATCGCCCG CTTCTTCGCC CGCGAAATGA TGGCGGAAGG ACCGTTCCCG GAGCACTACG AGCCGTTCGA AACGCCGATC GGCACCAACC CGATGAACAA GAATCCCAAG GCCATCAGCA ATCCGGCCGC CCGGGTGTTC AAGGGGGACA TGGAAGTCTT CGGCACAGCC AAGGACTTCC CGTATGCCGC GACGACCTAT CGCCTGACCG AGCATTTCCA CTACTGGACC AAGCACGCCA AGATCAACGC GATCCTGCAG CCGGAACAGT TCGTGGAAAT CGGCGAGGAA CTGGCGAAGG AGAAGGGCAT CGCCAGTGGC GACAAGGTCA AGGTGCGCTC CAACCGGGGC TTCATCAAGG CCGTGGCGGT GGTCACCAAG CGCATCAAGG GGCTCAATGT GAACGGACAG AAAGTTCACC ACGTCGGCAT CCCCATCCAC TGGGGATTCA AGGGCGTGGC GCGGATGGGC TTCCTGTCCA ACACCCTGAC GCCCTTCGTC GGTGACGCGA ACTCGCAAAC ACCGGAGTTC AAGTCCTTCC TCGTCAACAT CGAGAAGATC TAA
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Protein sequence | MASLAPTFGR GAMTNHWVDI KNADVVLVMG GNAAEAHPVG FKWVIEAKKQ NKAKLVVVDP RFTRSASVAD FYAPIRTGTD IAFLGGVINY LLTNDKIHHE YVKAYTDFSF LVGNDYAFDD GIFSGYNPEK RSYDKASWNY VKGEDGYVKT DPTLQDPRCV YQLMKQHYSR YTPEMVEKIC GTPKDAFLKV AEMMASTATG DRTMTILYAL GWTQHSQGSQ MIRTGAMVQM LLGNIGVAGG GMNALRGHSN IQGLTDLGLM SNLLPGYMTL PGEKETDYAA YIAKRAPKPM RPNQMSYWQN YEKFHVSLMK SWFGDAATKE NNWGFDMLPK LDKVHDVLMV MDDMYQGKMN GYFCQGFNPL ASFPNKAKLG AAMAKLKYMV IIDPLATETS EFWKNYGEYN DVDPAKIQTT VFRLPSSCFA EEDGSLVSSS RLLQWHWKGA EPPGEAKTDP AIMAGIFMKL KAMYKEKGGA YPDAILNLTW AYKDPYEPSP EEVAKEYNGK ALVDLYDPKD PTKLIRKAGE QLDSFALLRD DGTTTSGCWI FSGAWTQAGN NMARRDNSDP WGNGQTLNWA WAWPVNRRIL YNRASCDPSG KPFNPKRKQI WWNGTAWTGS DIPDFKADSN PADGMGPFIM NPEGIARFFA REMMAEGPFP EHYEPFETPI GTNPMNKNPK AISNPAARVF KGDMEVFGTA KDFPYAATTY RLTEHFHYWT KHAKINAILQ PEQFVEIGEE LAKEKGIASG DKVKVRSNRG FIKAVAVVTK RIKGLNVNGQ KVHHVGIPIH WGFKGVARMG FLSNTLTPFV GDANSQTPEF KSFLVNIEKI
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