| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1771 |
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| Symbol | |
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| ID | 3567829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1906192 |
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| End bp | 1907541 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637680240 |
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| Product | PAS:GGDEF |
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| Protein accession | YP_284988 |
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| Protein GI | 71907401 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCAC GCAAACCGCG CATCCTGGCC ATCGACGATA TGCCGGGAAA TCTATATACG
CTAGGGACCG CCCTGGCTAA CGACTTCGAC CTGGAAATCG CCACCTCGGG CAGTCAGGGA
CTGACCATGG CAAAACATTC GCCCCCCGAT CTGGTCCTGC TCGATATCAT GATGCCGGAA
ATGGATGGCC TTGAAACCTG TCGCCGTTTC CGCAGTGACC CTCGCCTGCA GGCCGTTCCC
ATCATCTTCC TGACCGCGCT CACCGACGTC GACTCGGAGG TGACAGGCCT CGATCTTGGC
GTGGCAGACT ACATCACCAA GCCATTCCAC CTCGATATCG TCAAACTACG TATCCGAAAC
ACCCTCAAGT TAGCCAGCCT AAACCGGGAA TTGCGGGCCA GCGAAGAACG CATGCGCTTC
GTGCTCGACG CCACCGGCGA TGGCATCTGG GACTGGGAGA TTGAATTCAA TCGCGTCAGT
CACAACGAGG CCTGGTGCCG CATGATGGGT TTGGATACGA GTTTTCTCAG CCACCCGCTC
GCGGATTACG TCGAGCGCAT TCACCCCGAA GACCTCGCTG CGGTCGAGCG GGCGCTGGAT
ATCAGCACCC ATGAAAACAC GCTCTTCACC GCTGAATACC GCATCCGGCA TAGTGATGGG
CACTATTTGT GGATATCGGA TACCGGCCAG GTCGTTGACC GGGACATCGA CGGCAAGGCG
AGCCGCATGG TTGGCTGCGT CAAGAATATC GATGAGCGGA AACGCAGCGA AGCCGATATT
CACAGACTGG CTTTTTTCGA CGCACTGACC GAACTGCCCA ATCGCCGGCT ATTGATGGAC
CGCCTGCAAC AGGCCATTTT CCACAACACC CGGAATAACA GCCTGGGTGC CCTGTTATTC
CTGGACATGG ACCACTTCAA GCAACTGAAC GACACCCACG GACATGCCAT GGGCGATGCC
ATGCTCATTC AGGTTGCTTC ACGGCTTAGA CGCAACGTGC GCGAACAGGA CACAGTTTCG
CGCCTGGGAG GGGACGAATT CGTTGTCCTG CTCGAAAGCC TGGCCCCTGA CCCGGTTAGC
GCCGGCAATG CGGCAACACT CATTGGCGAG AAGTTGCTGG GCGCCTTGAA TAGTCCTTAC
CAGTTGGGCT CCATCAAGCA CCACAGTAGC CCCAGTATCG GCCTCACCCT GTTTGGTGGT
GACAACGAAC AACTCGATGA GATCCTGAAG CGGGCAGACC ATGCCATGTA CGAAGCCAAG
GGGGCCGGAC GCAACACCTT GCGCACACTG ATCGATACCG AGCAACTACG TGCCACCCAG
CCCAATCGGG GCAAGCCAAC ATCCGCTTGA
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| Protein sequence | MSPRKPRILA IDDMPGNLYT LGTALANDFD LEIATSGSQG LTMAKHSPPD LVLLDIMMPE
MDGLETCRRF RSDPRLQAVP IIFLTALTDV DSEVTGLDLG VADYITKPFH LDIVKLRIRN
TLKLASLNRE LRASEERMRF VLDATGDGIW DWEIEFNRVS HNEAWCRMMG LDTSFLSHPL
ADYVERIHPE DLAAVERALD ISTHENTLFT AEYRIRHSDG HYLWISDTGQ VVDRDIDGKA
SRMVGCVKNI DERKRSEADI HRLAFFDALT ELPNRRLLMD RLQQAIFHNT RNNSLGALLF
LDMDHFKQLN DTHGHAMGDA MLIQVASRLR RNVREQDTVS RLGGDEFVVL LESLAPDPVS
AGNAATLIGE KLLGALNSPY QLGSIKHHSS PSIGLTLFGG DNEQLDEILK RADHAMYEAK
GAGRNTLRTL IDTEQLRATQ PNRGKPTSA
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