Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1750 |
Symbol | |
ID | 3568705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1880846 |
End bp | 1883131 |
Gene Length | 2286 bp |
Protein Length | 761 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637680219 |
Product | surface antigen (D15):surface antigen variable number |
Protein accession | YP_284967 |
Protein GI | 71907380 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.330816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAT CCCTGTTGTC CATCCTGATT GCCGGCATGT TTGCCACGCC AGCCTTGGCA TTCGAACCTT TTGCGGTCAA GGACATTCGG GTTGAGGGAA TTCAGCGGAC CGAAGCTGGT ACAGTTTTCG GGTATCTGCC CGTCAAGGTC GGTGATACCT TGAACGACGA GAAGGCTGCG CAATCGATCA AGGCTCTTTT TGCGACCGGA TTCTTCAAGG ATGTCCGGAT TGAGGTTGAG CAGGACGTGA TGGTCGTTGT GGTCCAGGAG CGCCCGGCTG TTGCGACCAT CAATTTTGTT GGCCTCAAGG AATTTGACAA GGATGTCATC GTCAAGGCAC TCAAGGAAAC GGGGATCGCC GAAGGGCGTA TTTTCGATCG TGCCCTGCTG GAAAAAGCCG AGCAGGAGCT CAAGCGCCAG TATCTGACGC GCGGCAAGTA TGCGGCCAAT ATCACCACGA CCGTGACGCC GCTGGAGCGC AATCGCGTTG GTGTCAACTT CAATATCGAA GAGGGTTCGG CAGCCAAGAT CAAGCAGATC AATATTGTTG GTGCCAAAGC CTTCCGTGAG AAGGAATTGC TCAGCCAGTT CGAATTGACG ACCCCGGGCT TGATCACCTG GTATACGAAG AATGATCAGT ATTCCCGGCA AAAATTGTCG GCTGATCTGG AAAAACTGAA GTCGTTTTAC ATGAACCAGG GTTATCTGGA GTTTGCGGTC GAGTCGACGC AGGTTTCCAT TTCTCCGGAT AAGCAGGATG TTTACATCAC TGCCAACATC AATGAAGGCG ATCGTTATCA GGTATCGTCA GTCAAGATGG CCGGTGATTT TTCGATTGCC GAAGATGAGT TGAAAAAACT CGTCACGATC AAGCCGGGTG ACGTATTTTC GCGTGACAAG CTGAATGCAA CGACCAAAGC AATTAGCGAC CGCCTCGGCA AGGAAGGCTA TGCCTTCGCC AACGTCAATG CTGCACCGGA AATTGACAAG GAAAAGCATC ATGTTGCTTT CACTATCTTT GTTGATCCGG GTAAGCGGGT TTATGTTCGC CGCCTGAATA TTACGGGGAA TACCAAAACG CGGGACGAGG TGGTTCGTCG AGAAATGCGT CAGATGGAAG GCGGTTGGTA CGATGCTGAC AAGGTCACAA CATCCAAGCA ACGCGTTGAT AAGCTGGGTT TCTTCTCGGA AGTTGCGGTT GAAACTCCTG CTGTCACTGG CACGTCCGAC CAATTGGACG TCAACGTCAA CGTTACTGAA AAGCCGACCG GGAATTTGAT GCTGGGTGTC GGTACTTCGA GTACCGATAA GGTGATCCTG TCTGGCTCCA TCGCCCAGAA CAACTTCATG GGTAGCGGCA ACAACGTCGC CATCCAGGTT AATTCGGCCA AGACCTACAG GACATACGTT TTCTCCTATA CCAATCCTTA CTTTACGCAG GATGGGGTGA GTCAAGGTTT TGACGTCTAT CATCGGACTG TCAATACGAC GTCTACAACG CTTGCTTATT ATTCGTCATC ATCGACCGGT GGCGGCATTC GTTTTGGCTT TCCGATCGGT GAAAAAGAGT CGATCGGTCT AGGCCTTGGG CTTGATTCGA CTAGTATCAC CACCTACGAC CAGACGCCGC AGTACTACAA GGATTTTGTA CGTCGGTTTG GCGAAACGAA TATCTCGGTT CCGCTGACTT TGAGCTGGGC GAGTGATGGC AAGGACAGCT TTTTCTTCCC GACCAAGGGG ACGTTCCAGC GAGCATCCCT TGAGGTGGCT TTGCCTGGCG GTGATTTGAC CTATTACAGA GCCAGTTATC AGCTCCAGCA CTTTGTGCCG CTAAACTCGA AATTCACGCT GATGCTGAAC GGCGAATACG GGATGGCTAA TGGTTATGGC GCGTCCGGGC TTCCGTTCTT CAAGAATTAT TATGCGGGTG GTGTAACCTC TGTTCGTGGC TACAAGGCCT CTTCACTGGG CCCAATCTAT ACGGATTCTT CCACGGGTAC GCAATATCGC TTGGGTGGCA ATCGCCGCGT GATCGGTAAT GCAGAGTTAC TGTGGAGCCT GCCGGGAATG GATAAGTCGT TCCGCATGGG GTGGTTCTTT GATGCGGGTC AGGTCTTTGG CAGTGACGAA AAGCTTGATT TCGCAGAATT GCGTTATTCC TCAGGTCTTT CGGCTGCCTG GATTTCACCT ATCGGGCCGC TAAAATTCAG TTTCGGTCGG CCTTTGAACA AAAAAGAAGG CGATAAGTCC GAAGTGTTCC AGTTCCAGTT GGGCACCACG TTTTAA
|
Protein sequence | MKKSLLSILI AGMFATPALA FEPFAVKDIR VEGIQRTEAG TVFGYLPVKV GDTLNDEKAA QSIKALFATG FFKDVRIEVE QDVMVVVVQE RPAVATINFV GLKEFDKDVI VKALKETGIA EGRIFDRALL EKAEQELKRQ YLTRGKYAAN ITTTVTPLER NRVGVNFNIE EGSAAKIKQI NIVGAKAFRE KELLSQFELT TPGLITWYTK NDQYSRQKLS ADLEKLKSFY MNQGYLEFAV ESTQVSISPD KQDVYITANI NEGDRYQVSS VKMAGDFSIA EDELKKLVTI KPGDVFSRDK LNATTKAISD RLGKEGYAFA NVNAAPEIDK EKHHVAFTIF VDPGKRVYVR RLNITGNTKT RDEVVRREMR QMEGGWYDAD KVTTSKQRVD KLGFFSEVAV ETPAVTGTSD QLDVNVNVTE KPTGNLMLGV GTSSTDKVIL SGSIAQNNFM GSGNNVAIQV NSAKTYRTYV FSYTNPYFTQ DGVSQGFDVY HRTVNTTSTT LAYYSSSSTG GGIRFGFPIG EKESIGLGLG LDSTSITTYD QTPQYYKDFV RRFGETNISV PLTLSWASDG KDSFFFPTKG TFQRASLEVA LPGGDLTYYR ASYQLQHFVP LNSKFTLMLN GEYGMANGYG ASGLPFFKNY YAGGVTSVRG YKASSLGPIY TDSSTGTQYR LGGNRRVIGN AELLWSLPGM DKSFRMGWFF DAGQVFGSDE KLDFAELRYS SGLSAAWISP IGPLKFSFGR PLNKKEGDKS EVFQFQLGTT F
|
| |