Gene Daro_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1742 
SymbolrpsB 
ID3568484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1873667 
End bp1874413 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content56% 
IMG OID637680211 
Product30S ribosomal protein S2 
Protein accessionYP_284959 
Protein GI71907372 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTA CCATGCGCGA AATGCTGGAG GCTGGTGTCC ACTTCGGTCA CCAGACCCGT 
TTCTGGTCCC CCAAGATGGC CCCGTACATC TTCGGTGCAC GCAACAAGAT TCACATCGTC
AATCTCGAAA AGACCCTGGC TAAGTACAAC GAAGCTATGG CGTTCGTGAA GAAGCTGGCT
TCCAGCCGCG GCACCATCCT GTTTGTCGGT ACCAAGCGTC AGGCTCGCGA AATCATCGGC
GAAGAAGCGC TGCGTGCCGG TGCTCCGTTT GTCGATCAGC GTTGGCTGGG TGGCATGCTG
ACCAACTTCA AGACGGTCAA GACCTCGATC AAGCGCCTGA AAGACATGGA AGTGGCTGTT
GAGGCTGGCG AGCTGGAAAA AATGCCGAAG AAGGAAGCGC TGACCTTCCG TCGCGAACTG
GAAAAGCTGC AGAAGTCCAT CGGCGGCATC AAGGAAATGG CCGGTCTGCC GGATGCTATC
TTCGTCATCG ACGTTGGTTA CCACAAGATC GCCATCACCG AAGCCGAAAA GCTCGGTATC
CCGGTTATCG GTGTGGTCGA TACCAACCAC TCTCCGGACG GTGTTGCTTA CGTCATTCCG
GGTAATGATG ACTCTTCCCG TGCCATTCAG TTGTATGCCC GTGGTGTCGC TGATGCCATC
CTCGAAGGTC GCAGCCAGGT GGTTCAGGAT ATCGTGGCCG CTGGCGGCGA CGACGAATTC
GTCGAAGTCC AGGACGCTGC ACAGTAA
 
Protein sequence
MSVTMREMLE AGVHFGHQTR FWSPKMAPYI FGARNKIHIV NLEKTLAKYN EAMAFVKKLA 
SSRGTILFVG TKRQAREIIG EEALRAGAPF VDQRWLGGML TNFKTVKTSI KRLKDMEVAV
EAGELEKMPK KEALTFRREL EKLQKSIGGI KEMAGLPDAI FVIDVGYHKI AITEAEKLGI
PVIGVVDTNH SPDGVAYVIP GNDDSSRAIQ LYARGVADAI LEGRSQVVQD IVAAGGDDEF
VEVQDAAQ