Gene Daro_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1657 
Symbol 
ID3568842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1781164 
End bp1782192 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content60% 
IMG OID637680125 
Producthypothetical protein 
Protein accessionYP_284875 
Protein GI71907288 
COG category[L] Replication, recombination and repair 
COG ID[COG5377] Phage-related protein, predicted endonuclease 
TIGRFAM ID[TIGR03033] putative phage-type endonuclease 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGG AGTCTGTCAT GGCACTACCG AATACTGCGC TCGCGATCCC GACGATCTCA 
CCCCGGCCAG CCCTCAAGCT CGTCAAGACC CTCAACCTCA GCCGAGAACG TTGGCTCGAT
GTCCGCAAGC AAGGGATCGG CAGTTCCGAT GCCGCCGCAG CCGTCGGTCT CAATCCCTAC
AAATCCCCGC TCGAACTCTG GCTCGAGAAG ACCGGTCGCG ACGGCAACTT GCCAAAAGCC
GATCCGCACG ATGAAGAATC CCCACTCTAC TGGGGAACCC TGCTCGAACC CATCGTCGCG
GCTCACTACA CCAAACGAAG CGGACATCGG GTCCGGCGGA TCAATGCCGT CCTCCAGCAT
CCCGATCCGG ACAAGGCCTG GATGCTGGCC AACATCGACC GGGAAGTCAT TGGCGTACCG
GATGTCCAGA TCCTCGAGTG CAAGACCGCC GGCATCAATG GCGCACGCCT ATGGAAGGAA
GGCGTTCCTG AATACGTTCA ACTGCAAGTG CAACATCAAC TCGCCGTCAC CGGCAAACAA
GCGGCCGATG TGGCAGTCCT GATCGGTGGT CAGCATCTGG AAATTCATCG GATCGAACGT
GACGACCTCC TGATTGGCCG TCTGATCGAA CTGGAACGAC ACTTCTGGCA GTACGTCGAG
ACCGATACCC CACCGCCGGC CGATGGCTCG GACTCCGCCG ACACGGCCCT CAAGGCCCTC
TATCCCTGTG ATAGCGGAAC GACCGTCGAT TTCAGCGATA ACCGGAACCT GTCGGCCACC
TTTGCCGATT GGCTCTCGGT ACGGCAAACC CTTGCTGATA CCGAAGCCTT TGAAGCCCAG
TTGAAGCAAA CCCTGCAACA GGCAATGGGC GAAGCCAGCA AAGCGTGCTT CGAGACGGGG
GCAGTGACCT GGAAGAAAGC CAAGGACAGC ACCACGATCG ATCTCCCCGC CTTGCTCAAG
GACTATCCCG AGTTCCAGCA GCGCTATGCG ATCGCCAAGC CGGGCAGCCG ACGTTTCCTT
GTCGCCTGA
 
Protein sequence
MSKESVMALP NTALAIPTIS PRPALKLVKT LNLSRERWLD VRKQGIGSSD AAAAVGLNPY 
KSPLELWLEK TGRDGNLPKA DPHDEESPLY WGTLLEPIVA AHYTKRSGHR VRRINAVLQH
PDPDKAWMLA NIDREVIGVP DVQILECKTA GINGARLWKE GVPEYVQLQV QHQLAVTGKQ
AADVAVLIGG QHLEIHRIER DDLLIGRLIE LERHFWQYVE TDTPPPADGS DSADTALKAL
YPCDSGTTVD FSDNRNLSAT FADWLSVRQT LADTEAFEAQ LKQTLQQAMG EASKACFETG
AVTWKKAKDS TTIDLPALLK DYPEFQQRYA IAKPGSRRFL VA