| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1548 |
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| Symbol | |
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| ID | 3566160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1657624 |
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| End bp | 1658952 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637680016 |
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| Product | aromatic hydrocarbon degradation protein |
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| Protein accession | YP_284767 |
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| Protein GI | 71907180 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000000000033121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00764259 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACAAAA ACCTCGCACC GCGTCTGATC CCGGCGCTGA TTGCCATTGC GTTTTCAGGT
GGCGCTTCAG CTTCTGGCTT CCAGTTGCTT GAACAAAACG CTAGTGGCCT GGGTAATTCC
TATGCCGGTT CCGCAGCAGT TGCAGAAAAT GCCAGTACGA TTTTCTACAA TCCGGCCGGC
ATGACACAGT TGAAGGGTTT GCAGGTTTCC GGTGGCTTGA CTGCAATACA CACCAGCTAC
AAGTTCTCCG ACCAAGGCTC TAGTGTTGGT GTTTTGCAGA ATTCTGGTAA CGGTGGAGAT
GGCGGTGGCT GGGGTTATTT GCCTAATGCG TACATTTCTT GGGAAGCTAC CAAAGACTTG
TATCTTGGCC TGGGTATCGG TGCGCCTTTT GGCTTGAAGA CCGAGTACAA CAACCCATGG
CAAGGTGGGG CGCAGTCTCT AAAATTTGAT ATCAAGACAG TCAATATCAA TCCGAGCATT
GCTTGGCGGG CGAATGAGTT TGTTTCAGTT GGTGCTGGTA TCAACTATCA GAAATTGACC
GCTGAATACG AGCGTCAGGT AGCTGTTGCA AGTACTTCTG GTCTTGCTGT TGCAACAATG
CTTTCTACAA CGAAGGCAAC ACTGAATCTG GATGATGATG CATGGGGGTG GAATGTTGGC
GCCCTGTTTT CCATTAACCC AACTACCAAA ATCGGTGTTT CTTATCGTTC GGCTGTGAAA
TATGATTTGA CGGGAGATTT CAAGTTTGAT GGAACACTGG CTCAATCGAG CAATCCATTG
TTGGGTGGGG CAACTAAAGA TCGTAGTGCA AAAGCTACCT TGAAGGTGCC TGATACTTGG
ATTCTTAGCG CCACGCATGC TTTGAATGAT CGTGTCGAGT TGTTGGGTGA TATCTCTTGG
ACGGGCTGGA GTTCAATTCC CAAAGTAGAT GTTTATAACG CACAAACAAC TGGTGCGGGA
GCAGTTTCTG GCCGTATCGC ACAGACTCTC GACACAGAGT TTCGCGATAC GTGGCGTGTC
GCTGCTGGTG CGAACTACCG ATATACGGAA GCTTTAAAGT TCAAGTTTGG TATTGCTTAT
GATCAAACGC CGGTGAAGGG CGCGTCTACT CGTCTTGTTT CCTTGCCAGA CAACAACCGT
ATCTGGCTCT CGTTTGGTAC CCAATGGAAG CCGACCAAGG ATTCGGCAGT GGACCTCGGT
ATTGCTCACC TTTTCGTCAA GGATTCAAAG ATTGACAACG ATCAGTCTGC AGCAGGACGT
GGTCGTGTTA CCGGTACGTT TGCCGACAGT GCTTGGATTT TTGGTTTGCA ATACTCAGCA
GCGTTCTAA
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| Protein sequence | MHKNLAPRLI PALIAIAFSG GASASGFQLL EQNASGLGNS YAGSAAVAEN ASTIFYNPAG
MTQLKGLQVS GGLTAIHTSY KFSDQGSSVG VLQNSGNGGD GGGWGYLPNA YISWEATKDL
YLGLGIGAPF GLKTEYNNPW QGGAQSLKFD IKTVNINPSI AWRANEFVSV GAGINYQKLT
AEYERQVAVA STSGLAVATM LSTTKATLNL DDDAWGWNVG ALFSINPTTK IGVSYRSAVK
YDLTGDFKFD GTLAQSSNPL LGGATKDRSA KATLKVPDTW ILSATHALND RVELLGDISW
TGWSSIPKVD VYNAQTTGAG AVSGRIAQTL DTEFRDTWRV AAGANYRYTE ALKFKFGIAY
DQTPVKGAST RLVSLPDNNR IWLSFGTQWK PTKDSAVDLG IAHLFVKDSK IDNDQSAAGR
GRVTGTFADS AWIFGLQYSA AF
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