Gene Daro_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1527 
Symbol 
ID3568632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1635537 
End bp1636175 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content53% 
IMG OID637679995 
ProductTetR family transcriptional regulator 
Protein accessionYP_284746 
Protein GI71907159 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTC AGCTTTCAAC TCCCCGTAGG CGTGGCCGAC CACCCAAACC CAGAGAGTAT 
TTGGTTGAAA CACGTGATTT GTTGCTGCGC GCCGGCTTGG AAGTTCTGAC CGAGAAAGGT
TTCTCGGCCA CAGGCATTGA CGAAATCTTG CACCGTGTCA GCGTTCCGAA AGGGTCTTTC
TATCATTACT TTGAAAGCAA AGAGGCATTC GGTGCAGCGT TAATTGCGCA ATATGCTCAT
TTTTTTGCTC GCAAGATTGA CCATTATCTC AGCGACAAAA CCATCTCTCC GCTCGCGCGT
TTACGCGCTT TCGTAGCCGG AGCTCAAGCC GGCATGGCTC GTCACGATTT TCGGCGCGGC
TGCCTCATCG GAAATCTGGG TCAGGAAATG GGCTCCCTCC CAGAAAGCTT CCGCAGGCAG
TTGCAAGCGG TTTTCGACGA TTGGCAGTCA AGATTTGCGC GTTGCCTGAT GGCAGCTCAA
GAAGCTGGCG AGCTTTCACG GCAAGCCGAT TGTGAACAAC TCGCTGCTTT TTTCTGGATT
GGCTGGGAGG GTGCGGTGCT GAGGGCGAAG TTGGAACAAA GCGCAGAGCC GCTTGAAGTT
TTTGCACGAG GTTTTTTTGC TGGGTTACCC CCCGGCTAA
 
Protein sequence
METQLSTPRR RGRPPKPREY LVETRDLLLR AGLEVLTEKG FSATGIDEIL HRVSVPKGSF 
YHYFESKEAF GAALIAQYAH FFARKIDHYL SDKTISPLAR LRAFVAGAQA GMARHDFRRG
CLIGNLGQEM GSLPESFRRQ LQAVFDDWQS RFARCLMAAQ EAGELSRQAD CEQLAAFFWI
GWEGAVLRAK LEQSAEPLEV FARGFFAGLP PG