| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1494 |
|---|
| Symbol | |
|---|
| ID | 3569004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1610054 |
|---|
| End bp | 1611565 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637679962 |
|---|
| Product | electron transport complex, RnfABCDGE type, C subunit |
|---|
| Protein accession | YP_284713 |
|---|
| Protein GI | 71907126 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
|---|
| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.454099 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTTC TCGACCGCTT TCTCAAAGCC CCCAGTTGGG GCGTCCATCC GGAAGATCAC
AAGCGTCCGG CGGCGGATGC GCCGCTGCGT ATTTTCCCAA CGCCAGAACG CGTCTTCATG
CCTTTGCACC AGCATGTTGG CGGCGTCGCG CGTCCCATCG TGCTGGTCGG TCAGAAAGTG
CTCAAGGGCG AGTTGATCGC CGAGGCGCAG GGCAATATCT CGGCCCCCAT CCATGCGCCG
GTTTCCGGAA CGATTGCCGC GGTCGGTGAC GTGACCGCTC CCCATCCGTC CGGCATGCCT
TTCAAGGCGA TCACCATCGA ATCCGACGGC GCCAACCGCT GGATCGATTG CAAACCGCTG
GCTGACCCGT TCTCGGCTGC GCCCGAGGAA ATCACCAAGC GTACGGCCGC CGCTGGCGTC
GTCGGCCTGG GCGGCGCGAC CTTCCCGGCC GCCCCCAAGT TCGCGCTGGG CAAGCGTCTC
AAGGTATCTA CGCTGATCGT CAATGGCGGC GAATGCGAAC CCTATCTGTC GAGCGACGAC
CGCATCATGC GCGACTACCC AGAGATGGTG GTCGATGGCG CGCGTCTGGT CATGCATGCG
ATCGGCGCCA GTGAGGCGCT GGTCGGCATC GAGGAGAACA AGCCTGAGGC CATCGCGGCG
ATGCGCAAGG CCGCCGCGGC CTTCCCCGAA GTCAAGATCC GGCCGCTGCC GGCGCTCTAC
CCGATGGGTT CCGACCGCCA GCTGATCAAG GTCCTGACCG GCATCGAGGT GCCTTCCGAC
GCCCGCGCCG CCGAAACCGG CGTGCTGGTC CATAACGTCT CGACCTGCGC CGCGGTGCAT
AAGGCGATCC GCCTCGGGCA GCCGCTGGTC GAGCGCATCA TCACCATCAA CGGTGGCGCG
ATCGCCAATC CCGGCAATCT CTATGCGCCG CTCGGCACGA TGATCGGCGA TCTGTTCGCC
TTCGTCGGCC TCAAGGAAGC GCCGTCGCGC ATCATCCTCG GCGGCCCGAT GATGGGCACG
CCGCTGCTGC ATGACCGGAT TCCCATCGTC AAAGGGGCTT CCGGCATCCT CGCCTTCAAT
GCGGCGGAAG CCTTGGTACC GGAGGCCGGT CCCTGCATCC GCTGCGGTAA CTGCACCAAG
GCCTGCCCGA TGGGGCTGTT GCCGCTCGAA ATGGCCGCCC GCATCCGGGT CGGCGATCTC
GAAGGGGCGG AGGCCTTCGC CTTGTCGGAT TGCATCTCCT GCGGCTGTTG CGCCTATGTC
TGCCCGTCGC ACATCCCGCT TGTCCAGTAT TTCAGCCATG CCAAGGGCGA ATTGACAGCA
GCCGAGCGGA CCAAGCTGCG GACCGATGCG ACCAAGCGGC TGGCCGAGGC AAAGGCTGCC
CGGGTCGAAC GGGAAAATCG TGAAAAGGCC GAAGCCGCCG CCAAACGCAA GGCCGAGCGC
GAGGCAGCCA AAGCGGCTAC CGCACAGCCG GCTTCAGTCG CTGTCGAAAA AACCGAGGGA
GCGTCAGCAT GA
|
|---|
| Protein sequence | MGFLDRFLKA PSWGVHPEDH KRPAADAPLR IFPTPERVFM PLHQHVGGVA RPIVLVGQKV
LKGELIAEAQ GNISAPIHAP VSGTIAAVGD VTAPHPSGMP FKAITIESDG ANRWIDCKPL
ADPFSAAPEE ITKRTAAAGV VGLGGATFPA APKFALGKRL KVSTLIVNGG ECEPYLSSDD
RIMRDYPEMV VDGARLVMHA IGASEALVGI EENKPEAIAA MRKAAAAFPE VKIRPLPALY
PMGSDRQLIK VLTGIEVPSD ARAAETGVLV HNVSTCAAVH KAIRLGQPLV ERIITINGGA
IANPGNLYAP LGTMIGDLFA FVGLKEAPSR IILGGPMMGT PLLHDRIPIV KGASGILAFN
AAEALVPEAG PCIRCGNCTK ACPMGLLPLE MAARIRVGDL EGAEAFALSD CISCGCCAYV
CPSHIPLVQY FSHAKGELTA AERTKLRTDA TKRLAEAKAA RVERENREKA EAAAKRKAER
EAAKAATAQP ASVAVEKTEG ASA
|
|---|
| |