Gene Daro_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1441 
Symbol 
ID3569048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1566315 
End bp1568699 
Gene Length2385 bp 
Protein Length794 aa 
Translation table11 
GC content54% 
IMG OID637679909 
ProductPAS 
Protein accessionYP_284660 
Protein GI71907073 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.876573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGGC TTGGCTTGAT CTCGCGTATC GCATTTCTGG TTATTGGTGT CGAAGTTGCT 
GCCTTTGGTG TGCTTGGAGC GTTCTATATT GATCGCTTCA ATACAGCCCT GGACACGAAC
ATCCATTCGC GTCTTAGCCT TGTCGGCCAA ATGATCGCTG GAGACGAACT GGCAGTAAGT
GCCATTTCGC GTGTTTCATT TATGAGCGAA CTGCTGGGTG CGCCCTATTT GAAGGGAATA
GTTGTTGGGG GCAACGGGCG GGTCATCGTA TCTACCGATG CCTCTCAACT TGGCCAGGAG
GCCAGGAATG TTTCGGATAT CGATCCCCGA TGGCTGGATG CTTCAGCCGC TGATGAGCAG
TTCGTGATCG GTCCGGACAG CCTATGCAGC ATCAGGCACA TACACGGCGC TGCGAATGGA
GCCCCCCCCC TCTACATAAC GATAATCACG ATCAGTACGG CTGCACTGAA TGCACAGAAA
CGCTCCGTAG CCCTCTGGGG TCAAATCGGT TCGTTGCTTT TTATATTGCT CAGTTCGGCT
GCCATCGTGC TGATCGCTCA ACACCTCATT ACTCGTCGCG TCAAGCTGTC ACTCGATGTC
CTGAAAAAAG TCGAGGATGG CGCGATCGAT GCCCGGATTC CGGTTTCCCT GGAAGATGAA
CTTGGGCAGC TGCAGCGCGG CATCAATTCG ATGACCGCCA AGTTGGGTGA GTTGCTGCGA
CAGCATCGAG GAAATGCCGA TGAACTGAAG AAGCAGAAAG AGCTCCTTCA GTCCGTCATT
GAGCACACTC CGCTTCGCGT ATTCTGGAAA GACAAGGACT GTCGATATCT GGGCTGCAAC
AGCCTGTTTG CCCTCGACGC CGGCTTGACC TCACCTGATG AGTTGATTGG CAAGTCCGAT
TTCGAATTGA GCTGGCGTGA GCAGGCAGAG CTCTACCGGG CCGACGACCA GGCGGTGATG
GTTTCTGGCG TCCCGAAAAT TGACTTTGAG GAACCACAAA CCACGCCAGA CGGCCATACC
ATCTGGCTGA GCACCTCAAA GGTTCCGCTG CACACCGGGG ATGATGAAGT AATCGGTGTT
CTTGGCATTT ATACCGACAT TACGGAGCGC AAGAATACCG CTCAGGAATT GGCAAAGCAC
CGACTCCATC TGGAGCAACT GGTCGAAGAA CGGACCGAGG AACTCTTGCT GGCCAAAGAC
GCCGCCGAAA ACGCGAATAT GGCGAAGAGT GCCTTCCTTG CCAACATGAG CCATGAAATA
CGAACTCCCT TGAATGCCAT TGCCGGCATG GCTCATTTCA TCCGACGCGG CGGGTTGTCA
CCAAAACAGT CCGAGCAACT CGAAAAACTC GAAGGCGCCA GCACCCATCT CCTGAACATC
ATCAACGCGA TTCTGGAGCT TTCCAAGATT GAAGCCGGCA AATTCGAGAT CGAAGAATCT
CCGATCAAGG TGGAAAGTAT CCTGGGCAAC GTGCTTTCAT TGCTGCACGA TAGAGCAGAG
GCCAAGCACA TCAAACTGCT CTGCGAAATC GAATTGCTGC CGAAAGACCT GTTGGGCGAC
GCTACGCGTT TGCAGCAGGC CTTGCTCAAT TACACCACCA ATGCGGTCAA ATTCACGGAA
ACGGGTAGCG TTACCCTGCG TGTCCATCCA GTTGATGAGA ATGCAATTAG CACCGTTTTG
CGTTTCGAGG TCCGGGATAC GGGCATAGGC ATCGCGCCCG AGGTACTGCC AAAACTGTTC
TCTGCCTTCG AACAGGCTGA CAACAGCACC ACGCGAAAAT ATGGCGGTAC AGGCTTGGGG
CTGGCTATCA CGAAAAAGCT GGCCGAGATG ATGGGGGGCG ACTCGGGTGC TGAAAGCACG
TTAGGACGAG GTAGTACGTT CTGGTTCACG GTCAGGCTCA GGAAAGGCCC GGCTCAGGTT
GCCGAAACCC AGTTCTCACC AGTCACCGAT GCCGAGATGC AGCTCAAGAC GAATTTTGCC
GGGCGCCGGA TATTGCTGGC GGAGGACGAG CCGATCAATC GAGAGATCAC TCTTTCGTTG
TTAGAGGACG TGGGTTTGAC GGTAGATATT GCTGAAGATG GCATCGAGGC GCTCAAATTG
GCAGGCGCCA ATAACTATGC ACTGGTCCTG ATGGACATGC AGATGCCAGG TATGGATGGC
CTTGAGGCGA CGAGAAGCAT TCGCCGTCTG CCGGTATCTG GCGATGTACT CATCCTCGCC
ATGACGGCCA ACGCGTTTGT TGAAGACAAA CAGCGATGCC TCGATGCGGG AATGAACGAC
TTTATTTCCA AGCCGGTCGA TCCCAAACTG CTGTTCAATA AGCTCTTGAA ATGGCTCAGT
CAGGGCTCAC CGCGCAGGGA AGATACCCAA CTATCCGTCA ACTGA
 
Protein sequence
MFRLGLISRI AFLVIGVEVA AFGVLGAFYI DRFNTALDTN IHSRLSLVGQ MIAGDELAVS 
AISRVSFMSE LLGAPYLKGI VVGGNGRVIV STDASQLGQE ARNVSDIDPR WLDASAADEQ
FVIGPDSLCS IRHIHGAANG APPLYITIIT ISTAALNAQK RSVALWGQIG SLLFILLSSA
AIVLIAQHLI TRRVKLSLDV LKKVEDGAID ARIPVSLEDE LGQLQRGINS MTAKLGELLR
QHRGNADELK KQKELLQSVI EHTPLRVFWK DKDCRYLGCN SLFALDAGLT SPDELIGKSD
FELSWREQAE LYRADDQAVM VSGVPKIDFE EPQTTPDGHT IWLSTSKVPL HTGDDEVIGV
LGIYTDITER KNTAQELAKH RLHLEQLVEE RTEELLLAKD AAENANMAKS AFLANMSHEI
RTPLNAIAGM AHFIRRGGLS PKQSEQLEKL EGASTHLLNI INAILELSKI EAGKFEIEES
PIKVESILGN VLSLLHDRAE AKHIKLLCEI ELLPKDLLGD ATRLQQALLN YTTNAVKFTE
TGSVTLRVHP VDENAISTVL RFEVRDTGIG IAPEVLPKLF SAFEQADNST TRKYGGTGLG
LAITKKLAEM MGGDSGAEST LGRGSTFWFT VRLRKGPAQV AETQFSPVTD AEMQLKTNFA
GRRILLAEDE PINREITLSL LEDVGLTVDI AEDGIEALKL AGANNYALVL MDMQMPGMDG
LEATRSIRRL PVSGDVLILA MTANAFVEDK QRCLDAGMND FISKPVDPKL LFNKLLKWLS
QGSPRREDTQ LSVN