Gene Daro_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1400 
Symbol 
ID3569085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1529514 
End bp1530164 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content53% 
IMG OID637679868 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_284619 
Protein GI71907032 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value0.973321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0605156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TCAAGGTACT TCTCGCGGAT GATCACACCA TCATTCGTGA TGGACTGAAG 
CAGATTTTGG CGGATACCGA AGACCTCGTC GTGTTGGGCG AGGCGGCAAA TGGCAATGAC
GTCATGCACT TGATCAGGGG GCAGAACTGG GGGGTTCTGG TTCTCGATAT CTCGATGCCT
GGACGTAGCG GCCTGGATCT GATTCGCATG ATCAAGGATG AAAAGCCATC GCTACCCATT
CTGATCCTGA GCATGCATCA CGAAGAGCAA TATGCCTTGC GCGCCATTCA TGCCGGCGCC
TCAGGTTATG TCACCAAGGA GAGCGATAGT GACTTGCTGG TTACCGCTAT CCGTCGGGTG
GCAGCGGGCG GGGTGTACAT CAGTGAAAAA GTGGCCGAAC TGATGGTTCG TGACATCCGG
CCTGCTATGG CGCCATTGCC CCATACCCTG CTGTCGGATA GGGAGTATCA GGTCTTCAAT
ATGCTTGTCA TGGGCAAGGG GCTGACGGAA ATTGGCGCTG AACTTTCCCT CAGCGTCAAG
ACGATCAGTA CGCATAAGAC CCATATTCTT CAGAAGATGA ATATGACCAA TGCCGCTGAG
TTGATTCGCT ACGCAATTGC CCACGGATTG AGCGATTCCA GCGATGCTTG A
 
Protein sequence
MEKIKVLLAD DHTIIRDGLK QILADTEDLV VLGEAANGND VMHLIRGQNW GVLVLDISMP 
GRSGLDLIRM IKDEKPSLPI LILSMHHEEQ YALRAIHAGA SGYVTKESDS DLLVTAIRRV
AAGGVYISEK VAELMVRDIR PAMAPLPHTL LSDREYQVFN MLVMGKGLTE IGAELSLSVK
TISTHKTHIL QKMNMTNAAE LIRYAIAHGL SDSSDA