Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1400 |
Symbol | |
ID | 3569085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1529514 |
End bp | 1530164 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637679868 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_284619 |
Protein GI | 71907032 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 0.973321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0605156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAAA TCAAGGTACT TCTCGCGGAT GATCACACCA TCATTCGTGA TGGACTGAAG CAGATTTTGG CGGATACCGA AGACCTCGTC GTGTTGGGCG AGGCGGCAAA TGGCAATGAC GTCATGCACT TGATCAGGGG GCAGAACTGG GGGGTTCTGG TTCTCGATAT CTCGATGCCT GGACGTAGCG GCCTGGATCT GATTCGCATG ATCAAGGATG AAAAGCCATC GCTACCCATT CTGATCCTGA GCATGCATCA CGAAGAGCAA TATGCCTTGC GCGCCATTCA TGCCGGCGCC TCAGGTTATG TCACCAAGGA GAGCGATAGT GACTTGCTGG TTACCGCTAT CCGTCGGGTG GCAGCGGGCG GGGTGTACAT CAGTGAAAAA GTGGCCGAAC TGATGGTTCG TGACATCCGG CCTGCTATGG CGCCATTGCC CCATACCCTG CTGTCGGATA GGGAGTATCA GGTCTTCAAT ATGCTTGTCA TGGGCAAGGG GCTGACGGAA ATTGGCGCTG AACTTTCCCT CAGCGTCAAG ACGATCAGTA CGCATAAGAC CCATATTCTT CAGAAGATGA ATATGACCAA TGCCGCTGAG TTGATTCGCT ACGCAATTGC CCACGGATTG AGCGATTCCA GCGATGCTTG A
|
Protein sequence | MEKIKVLLAD DHTIIRDGLK QILADTEDLV VLGEAANGND VMHLIRGQNW GVLVLDISMP GRSGLDLIRM IKDEKPSLPI LILSMHHEEQ YALRAIHAGA SGYVTKESDS DLLVTAIRRV AAGGVYISEK VAELMVRDIR PAMAPLPHTL LSDREYQVFN MLVMGKGLTE IGAELSLSVK TISTHKTHIL QKMNMTNAAE LIRYAIAHGL SDSSDA
|
| |