Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1393 |
Symbol | |
ID | 3566121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1523028 |
End bp | 1523843 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637679861 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_284612 |
Protein GI | 71907025 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | [TIGR02933] nitrogen fixation protein NifM |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.00207812 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.170973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACACG GTTACCTCGA ACTAAAACTG TCCTGGGAAC TCTTCAAGAA AGGCCCGGAA ACGCTGAGCG AACCGGAGCG CGACCGTCTC GACGATATCG CCCGCAAGCA GGACAGCATC GAACAGCGCA TCCTCGCCAG CGCGGCTTCG GCCAATGTCG TCGTCCCGGC CGCCACTGTG AAGAACCGGC TCGATGAAAT CCGCGCACGC TATCCGGCAA ATGAAGAATT CATCCTCGAC ATGGCACGCA GCGATCTTGA CGAAGCCGCG CTGGAACAGG CCGTCGAACG CGATCTGCGC ATCGAGGCTG TGCTCGAAAA GGTCGCATCG AGCAGCCCGC CGGTCAGCGC CGTCGATGCC GAAATCTACT ACCGTCTGCA TCCGGAAGCC TTCGATCGGC CCGAGGCCCG TCGCCTGCGC CACATCCTGA TTACCTTCAA CACCCCACAG GAAAAGGCCA AGGCAATTGC CACTCTGGAA TCGCTGCGCT CGACACTGAA AAATCCCGCA AAATTCGCCG AGGCGGCACT ACGCCATTCA CAATGCCCAA CCGCCATGGA AGGCGGCCAA CTCGGTACGG TAAAGCGTAA GCAGCTTTAC GCCGAACTTG AACCGGCTGC CTTCGCTTTG AACGAAGGTG AGATCAGCGC CGTACTTGCG TCTCCGATCG GCCTGCACAT CCTGCGCTGC GACGAAATTC TGCCGAGCGG CATGCTGGCG TTTGGCGAGG TATGCGAACG TATCATCGCG CGCCTGGGCG ACAAGCGCCG CCGCGAGGCG CAACGCGAAT GGATAAAGAG CCTCCCTGTC GCCTGA
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Protein sequence | MQHGYLELKL SWELFKKGPE TLSEPERDRL DDIARKQDSI EQRILASAAS ANVVVPAATV KNRLDEIRAR YPANEEFILD MARSDLDEAA LEQAVERDLR IEAVLEKVAS SSPPVSAVDA EIYYRLHPEA FDRPEARRLR HILITFNTPQ EKAKAIATLE SLRSTLKNPA KFAEAALRHS QCPTAMEGGQ LGTVKRKQLY AELEPAAFAL NEGEISAVLA SPIGLHILRC DEILPSGMLA FGEVCERIIA RLGDKRRREA QREWIKSLPV A
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