Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1354 |
Symbol | |
ID | 3569244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1473468 |
End bp | 1474256 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637679822 |
Product | hydratase/decarboxylase |
Protein accession | YP_284573 |
Protein GI | 71906986 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.000612409 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000118865 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAAATA ATTTTATGGC ACCGGAAGCC GCGGCGGCGC TGCTCAAGGC AGCGACCGCC GATGGTCGTC CCATTGCTCC CCTGCGCGAT CGCCTGGCTA TTGCCGATCA GGATTCGGCC TACGCCGTCC AGGAAATCAA CACGCGAGCC TGGTTGGCCG AAGGGCGTCG ACTGGTTGGT CGCAAGATCG GCCTGACCTC GCTGGCTGTC CAGGCCCAGC TCGGCGTCGA TCAGCCCGAC TTCGGCATGC TATTCGCCGA CATGGCGGTG GGCGATGGCG AGATCGTGGC TGCCGGCCGT CTGATCCAGC CCAAGGTCGA AGCCGAAGTC GCCCTGATCC TCGGTCGCGA CCTGACGCAG GAGCGCCACA CCTACGCCGA CCTGATCCGC GCCACCGAAT ACGCTCTTCC ATCGATCGAA ATCGTCGACA GTCGCATCGA GAACTGGAAC ATCAAGTTCG TCGATACCGT TGCCGACAAC GCTTCCAGCG GCCTGTTCGT GCTCGGTGGC CGTTCGGTCA GGCTCTGCGA CATCGACCTG ACGGCCTGTG CCATGGAAAT GAAACGTGGC GATGAAGTCG TCTCCCGCGG CAATGGTCGC GCCTGTCTGG GCAGCCCCTT GAATGCGGCC ATCTGGCTGG CCGACGTGAT GGTTCGCTGC GGTCGTCCGC TGCAGGCCGG CGACATCGTA CTGACCGGCG CGCTTGGCCC GATGGTCGCG GTCAAGTCCG GTGAGCGTTT CGACGTGAGC ATCGAAGGTC TCGGCAACGT CAGCGCCTTG TTTGCTTGA
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Protein sequence | MTNNFMAPEA AAALLKAATA DGRPIAPLRD RLAIADQDSA YAVQEINTRA WLAEGRRLVG RKIGLTSLAV QAQLGVDQPD FGMLFADMAV GDGEIVAAGR LIQPKVEAEV ALILGRDLTQ ERHTYADLIR ATEYALPSIE IVDSRIENWN IKFVDTVADN ASSGLFVLGG RSVRLCDIDL TACAMEMKRG DEVVSRGNGR ACLGSPLNAA IWLADVMVRC GRPLQAGDIV LTGALGPMVA VKSGERFDVS IEGLGNVSAL FA
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