Gene Daro_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1348 
Symbol 
ID3569238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1464087 
End bp1465211 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content56% 
IMG OID637679816 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_284567 
Protein GI71906980 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000439495 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000156637 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGCCCTT CCGAGAATGG CACCATGCAA GCAGCTCGCG TGCATGGCGC TGGCGGGCAG 
TTTGAGATGG ACAGCATCGA ACGCCCCCGG ATCAAACGTC CCACCGACGT AATAATCAAT
GTCAAAGCTA GCGGTGTCGT ACCAAATTTA CGCAACGTCA TGAGCAACTA TGGCGAACGC
GCTTATCTGA CCGTCCCTGA ATTACCGGCG ATCTATGGTC TAGATACTGC AGGCGTCATT
GCCGAAATTG GCAGTGGCGT CACGGGCCTC ACGGTCGGTG ATCGGGTTTA TCTGAATCCC
GGCCGCAGTT GCGGCACTTG TCATGCCTGC CGTTGCGGCG AGCCAATCAA CTGCAGCGCT
TACACATTTC AGGGTTACTT TGGTTTTGGT CCTGCGTCGC GCCAGATTTA TCGAGAATAT
CCCTATGGCG GGTTCTGTGA ATTCGCCACA GGCCCAGCTA ATGGGCTCAT CAAACTCCCC
GACACGATCA GTTTTGAACA AGCAGCACGC TTTGGCTATC TAGGTACTGC CTACTCCGGC
TTGCGCAAAG CCGATGTTCG TGCCGGCCGA ACGGTCCTGA TCAGCGGCGC CAGTGGAACG
CTGGGATTGG GCGCAGTACA AATTGCACGT GCGATGGGTG CCACCAGGAT TCTATGCGTC
GCACGCAACG CCGACTTGCT TGAACGTGTC CGCCTCTTGG ACCCCCAGCG TATCCGCACC
TTCTCTTACG GCACAGGAGA TCTTGCTACC TGGGCTCGTG ATGAAACAGA TGGAATCGGG
GTGGACGCTG TACTCGATGC CATCGGTCCG GGTGCCTCAC ATCAAGTGAC GCTCGACTGC
ATTGCTGCCT TGAGACGGGG TGGAAAACTG GTGGAGGTTG GCGCCATGTC CGACCCAATG
CCGGTTAATC TGCACCAGAT GATGTGCGCA CAGGTCAGCC TAATCGGCTC ACTCTGGTTC
TCGGTCGCCG AAGGACAGGA ACTCGCTGCG ATGGCCGATG CAGGAACCCT AGACCTGTCC
ATTTTCGAGC ATCACCGCTT CCCGCTCGAA CGAGTGAACC AAGCCTTGGA ACTTGCCGAA
AAGAGGATCG GCGGTTTCAT GAATGTCGTG ATCACCCAAG AATAA
 
Protein sequence
MGPSENGTMQ AARVHGAGGQ FEMDSIERPR IKRPTDVIIN VKASGVVPNL RNVMSNYGER 
AYLTVPELPA IYGLDTAGVI AEIGSGVTGL TVGDRVYLNP GRSCGTCHAC RCGEPINCSA
YTFQGYFGFG PASRQIYREY PYGGFCEFAT GPANGLIKLP DTISFEQAAR FGYLGTAYSG
LRKADVRAGR TVLISGASGT LGLGAVQIAR AMGATRILCV ARNADLLERV RLLDPQRIRT
FSYGTGDLAT WARDETDGIG VDAVLDAIGP GASHQVTLDC IAALRRGGKL VEVGAMSDPM
PVNLHQMMCA QVSLIGSLWF SVAEGQELAA MADAGTLDLS IFEHHRFPLE RVNQALELAE
KRIGGFMNVV ITQE