Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1319 |
Symbol | |
ID | 3569182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1434246 |
End bp | 1436222 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637679781 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal |
Protein accession | YP_284539 |
Protein GI | 71906952 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.179908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0765459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGG TCGAAAATCT CCGCCTGGGC TTCACGGCCG GCAAGAAAAC GCTGGCGGCA GTGGACGGCA TTTCCTTCGC CATTGCCAAA GGCGAGACGT TTGCGCTGCT TGGTGAATCC GGCTGTGGCA AGTCGGCGAC CGCGCAGGGC ATCATGCGCT TGCTGCCCGC CGCCGGGCGT ATCCTGAACG GCAGGGTCAC GCTGGATGGC GAGGAGCTGC TGAGCCTGCC AGAGGCCGAT ATGCGCGCCT ACCGCGGCGG CCGGATGGCG ATGATCTTTC AGGAACCGGC AACCAGCCTG AATCCTGTGC TCACGGTCGG CCAGCAGATT GGTGAAATGC TGGCCCGGCA TCTTGGCACG GGCGGCGTGG AAGCGACTGA GCGCATGGTC GATCTGCTGC GTCAGGTCGG GATTGCCGAC CCCGAGCGCC GCCTGACCGA ATATCCGTTC CAGCTATCCG GTGGCATGAA ACAGCGGGTC ATGATCGCCA TCGCCCTGGC TGGCGAGCCG GAGTTGTTGA TTGCCGACGA GCCGACCACC GCGCTTGATG TCACGGTTCA GGCGCAGATT CTCGATTTGC TGGCCAAACT GCAGGCCGAG CGTGGCATGG GCATGCTGCT GATTACCCAC GATCTCGGCG TCGTCGCGCG GATGGCCCAT CGCATCGGTG TCATGTACGC CGGCGAGTTG GTCGAAGTGG CCAGCCGTGA GGAATTTTTC ACCCGGCCGC GCCATCCTTA TACGCAAGCG CTGTTTGAAG CTTTGCCGGA TATTTCCCGG CGCGACGTAA GCCTGACAAC GATTCCCGGT CAAGTGCCTG CGCTGGCGGC CATGCCGGCT GGTTGTCGTT TTGCCGACCG TTGTCAGTAC GTCATGCCGG TTTGCCGCGA ACAGTCTCCG CCGTGGCGTG AATCGGCCGT TGGGCATGTG GTGCGCTGTC ACTGGCAGGG TGAATCGGTA GCGAGAAATG GGGCTGGGCA CGGCATCACT GAGCAAGATC TCACCCCGGG GCGTGCCTTC CTGGAAGTGG CCGACCTCAA GGTTTATTTT CCGATCCGCA AGGGTTTTCT GCAGCGGACA GTGGGCCATG TCCGAGCCGT TGATGGCGTG TCGCTGGCGA TTTCCGCCGG GCGCACGCTG GCCCTGGTCG GAGAGTCCGG CTGTGGCAAG ACGACGGTGG GCAAGTCGTT GCTGCAGTTG ATCCAGCCGA CCGCGGGCAG CGTCAGGCTG GGCGATAGCG AACTGGTTGG ACTCCAAGGC AAGCGCTTGC GTAGCGCCAG GCGCCATCTG CAGATGGTGT TCCAGGACCC ATTTGCCTCG CTGAATCCAC GCCTGCGGGT CGGCGAGATT ATTGCAGAAG GCATGGGCGC GCTGGGCATC GAGGCTGAGG CAGCAGCGCA AACAGCGGCC GTTGCAGCGT TGCTGCTGCA GGTTGGCCTG CCGGGCGACG CAGTGGACCG CTATCCGCAC GAGTTTTCCG GAGGCCAGCG TCAGCGTATC GCCATTGCCC GGGCGCTGGC GGTGCAACCA GAGTTGCTGA TCTGTGACGA ACCGACCTCG GCGCTCGATG TTTCGGTGCA GGCGCAGATC CTGAATCTGC TGAAGAAATT GCAAAGTGAG CTGGGCGTTG CCTATCTGTT CATTACCCAC AACTTTGCGG TTGTCGAATA TCTGGCCCAC GATGTGGCCG TGATGTATCT GGGGCGTATT GTCGAACGGG GACGTGCGGA GGAGGTTCTG CGCTCACCGC AGCATCCTTA CACGAAGGCC TTGCTGTCGG CTGTTCCGGT GCCGCGGCTG GATCGGCCTA CCGTGGCCAT CAAACTGCCT GGAGAAACCC CGTCGCCGGC CAATCCACCG ACCGGGTGTC ATTTCCATCC ACGTTGTCCT CAGGCAATGG ATGTTTGCCG GCAACGCTAT CCGCAGGCGA CCGAGATTTC AGCCACCCAC GCTGTCAGCT GTCATCTGCT GGGTTGA
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Protein sequence | MLKVENLRLG FTAGKKTLAA VDGISFAIAK GETFALLGES GCGKSATAQG IMRLLPAAGR ILNGRVTLDG EELLSLPEAD MRAYRGGRMA MIFQEPATSL NPVLTVGQQI GEMLARHLGT GGVEATERMV DLLRQVGIAD PERRLTEYPF QLSGGMKQRV MIAIALAGEP ELLIADEPTT ALDVTVQAQI LDLLAKLQAE RGMGMLLITH DLGVVARMAH RIGVMYAGEL VEVASREEFF TRPRHPYTQA LFEALPDISR RDVSLTTIPG QVPALAAMPA GCRFADRCQY VMPVCREQSP PWRESAVGHV VRCHWQGESV ARNGAGHGIT EQDLTPGRAF LEVADLKVYF PIRKGFLQRT VGHVRAVDGV SLAISAGRTL ALVGESGCGK TTVGKSLLQL IQPTAGSVRL GDSELVGLQG KRLRSARRHL QMVFQDPFAS LNPRLRVGEI IAEGMGALGI EAEAAAQTAA VAALLLQVGL PGDAVDRYPH EFSGGQRQRI AIARALAVQP ELLICDEPTS ALDVSVQAQI LNLLKKLQSE LGVAYLFITH NFAVVEYLAH DVAVMYLGRI VERGRAEEVL RSPQHPYTKA LLSAVPVPRL DRPTVAIKLP GETPSPANPP TGCHFHPRCP QAMDVCRQRY PQATEISATH AVSCHLLG
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