Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1317 |
Symbol | |
ID | 3569180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1431865 |
End bp | 1432842 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637679779 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_284537 |
Protein GI | 71906950 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0651157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCTT ACATCGTTCG CCGTCTTCTT TACGCCCTGC CGATCCTGAT CGGGGTAAAT CTCGTTACCT TTGCCCTGTT CTTCGTGGTC AATACGCCGG ATGACATGGC GCGCATGCAG CTCGGCGTGA AGCGGGTGAC GCCGGAGGCG ATCCAGAAAT GGAAGGTCGA GCGTGGCTAC GACAAGCCGC TGCTGATTAA CGCTGAGGCC TCGGGCCTGT CGACAGTCAC CGATACCGTG TTTTTCCAGA AATCGGCACG CATGTTCGTT GGTGACTTTG GCCGTGCCGA GGATGGACGG GACATTGCCC GCGAGATCAG CGGACGCATG GGGCCGTCCT TGGCCATCGC GCTACCAACC TTTGTTCTGG GCTTGCTTGT CACGGTCACT TTTGCCCTGA CTCTGGCTTT TTTCCGCGCG ACGGCTTTTG ATTTCTGGGG TGTCGTGCTG TGTGTGGCGA TGATGTCGAT CTCGGGTCTG TTTTACATCA TCGGCGGGCA ATACCTGATC AGCAAGCTCT GGCGTCTGGT GCCGATTTCA GGTTTTGGTG CCGGGCTGGA AGCCTGGCGT TTTTTGATCC TGCCAGTAGC GATTGGGGTG ATTTCCGGCA TCGGCTCCTC GACTCGCTGG TACCGGACCA TCTTCCTCGA AGAGGTCAGC AAGGATTATG TTCGTACGGC TCGCGCCAAG GGCCTGCCGG AAACGGTGGT TTTCTTCCGT CACGTGCTGC GCAATGCGCT GATTCCAATC CTGACCGGCG TCGTCGTGGT CATTCCGCTG CTCTTCATGG GGTCGCTGCT GACGGAGTCC TTCTTCGGTA TTCCCGGCCT TGGTAGTTAC ACCATCGATG CGATCAATGC ACAGGACTTT TCTGTGGTGC GTTCGATGGT TTTCATCGGC TCGGCGCTCT ATATCGTCGG CCTGATCCTG ACCGATATTT CCTACACGCT GGTTGATCCG CGGATCCGGT TCGAATGA
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Protein sequence | MLAYIVRRLL YALPILIGVN LVTFALFFVV NTPDDMARMQ LGVKRVTPEA IQKWKVERGY DKPLLINAEA SGLSTVTDTV FFQKSARMFV GDFGRAEDGR DIAREISGRM GPSLAIALPT FVLGLLVTVT FALTLAFFRA TAFDFWGVVL CVAMMSISGL FYIIGGQYLI SKLWRLVPIS GFGAGLEAWR FLILPVAIGV ISGIGSSTRW YRTIFLEEVS KDYVRTARAK GLPETVVFFR HVLRNALIPI LTGVVVVIPL LFMGSLLTES FFGIPGLGSY TIDAINAQDF SVVRSMVFIG SALYIVGLIL TDISYTLVDP RIRFE
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