Gene Daro_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1307 
Symbol 
ID3569170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1418511 
End bp1419368 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content52% 
IMG OID637679770 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_284528 
Protein GI71906941 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.186237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCACG GCGCTGCTAG TCAGGCAAAC GTCAGTCCGT CTCAAGTTGG AGGCTTAGAA 
ATAGTGCTGC CCAACATTGA GCAACAACGC CGAATCGCTT CCATCCTGTC CACCTACGAC
GACCTGATTG AGAACAACAC GCGGCGGATC GCTATCCTTG AGGAGATGGC CCGGAGGATT
TACGAGGAGT GGTTCGTCCA CTTCCGCTTT CCTTTACACG AACAGGTGAA GATGGTGGAG
TCCGAGTTTG GGGTGATACC AGAAGGGTGG AAAATCACTT CGCTCGGTGA AGCCTTCAAC
ATAGTATTGG GTGGTACGCC ATCTCGAAAC AAATCCGAAT ACTGGGACCA AGGCACCATC
CCTTGGATCA ACTCTGGCAA GGTTAATGAT CTTCGAATAA CTACGCCTAG CGAATACATC
ACTGATCTTG GCCTGAAAAA ATCGGCAGCC AAGCTGATGC CAGCAGCAAC CACTGTTATT
GCTATCACTG GAGCCACCCT TGGGCAAGTG AGCTACTTAT GCACAGAGAT GTCTGCCAAC
CAGTCTGTCG TGGGGGTGTT CGACGCATCA GGAAAATACA GCGAGTATAT CTATCGGCTA
ATCCAGAACA GGATCATGGC CATCATCCAA CACGCTAGCG GCGGAGCGCA ACAGCACATC
AACAAGGAAA TCGTGAATGA TGTTGTTCTA GTGTTACCCC CGGATGACGT GCTCTCTCTG
TTCAACAACA CAGCACTACC TATTGGCGAA CTAATCAACA CACTACTACA CAAGAACGCC
AACCTCCGCA CCACCCGCGA CCTCCTGCTC CCCAAACTGG TCTCTGGGGA ACTCGACGTA
TCCGAGATCG CAGCCTGA
 
Protein sequence
MAHGAASQAN VSPSQVGGLE IVLPNIEQQR RIASILSTYD DLIENNTRRI AILEEMARRI 
YEEWFVHFRF PLHEQVKMVE SEFGVIPEGW KITSLGEAFN IVLGGTPSRN KSEYWDQGTI
PWINSGKVND LRITTPSEYI TDLGLKKSAA KLMPAATTVI AITGATLGQV SYLCTEMSAN
QSVVGVFDAS GKYSEYIYRL IQNRIMAIIQ HASGGAQQHI NKEIVNDVVL VLPPDDVLSL
FNNTALPIGE LINTLLHKNA NLRTTRDLLL PKLVSGELDV SEIAA